RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 MICU3Q86XE3 530 aa17.21■□□□□ 0.35
CTDSP1-201ENST00000273062 MB21D1Q8N884 522 aa17.21■□□□□ 0.35
CTDSP1-201ENST00000273062 NAPBQ9H115 298 aa17.21■□□□□ 0.35
CTDSP1-201ENST00000273062 TSPYL2Q9H2G4 693 aaPredicted RBP17.21■□□□□ 0.35
CTDSP1-201ENST00000273062 SH2D4AQ9H788 454 aa17.21■□□□□ 0.35
CTDSP1-201ENST00000273062 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
CTDSP1-201ENST00000273062 MYH10P35580 1976 aa17.21■□□□□ 0.34
CTDSP1-201ENST00000273062 AFF2P51816 1311 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 XPO6Q96QU8 1125 aaKnown RBP17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 ELAC2Q9BQ52 826 aaKnown RBP17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 USP21Q9UK80 565 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 ANGEL1Q9UNK9 670 aaKnown RBP17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 KCNJ14Q9UNX9 436 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 TACC1O75410 805 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 OATP04181 439 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 PAFAH1B1P43034 410 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 HLTFQ14527 1009 aaKnown RBP eCLIP17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 RRAGBQ5VZM2 374 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 NOSTRINQ8IVI9 506 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 ZKSCAN3Q9BRR0 538 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 NEUROG2Q9H2A3 272 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 ECT2Q9H8V3 914 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 MINPP1Q9UNW1 487 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 SLC4A4Q9Y6R1 1079 aa17.2■□□□□ 0.34
CTDSP1-201ENST00000273062 RAD51CO43502 376 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 SETSIPP0DME0 302 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 TCP1P17987 556 aaKnown RBP17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 SP100P23497 879 aaPredicted RBP17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 TSR1Q2NL82 804 aaKnown RBP17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 ERMARDQ5T6L9 678 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 TMEM154Q6P9G4 183 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 LONP2Q86WA8 852 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 LRRC34Q8IZ02 419 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 SDR42E1Q8WUS8 393 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 ANKIB1Q9P2G1 1089 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 CNTNAP4Q9C0A0 1308 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 CNGA1P29973 690 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 GUCY1A2P33402 732 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 CCNG1P51959 295 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 NR5A1Q13285 461 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 WHAMMQ8TF30 809 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 ZSWIM5Q9P217 1185 aa17.19■□□□□ 0.34
CTDSP1-201ENST00000273062 STAT6P42226 847 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 ERVK-9P63128 1117 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 ANKS4BQ8N8V4 417 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 IGDCC4Q8TDY8 1250 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 NELFBQ8WX92 580 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 FAM129AQ9BZQ8 928 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 PREBQ9HCU5 417 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 AATFQ9NY61 560 aaKnown RBP eCLIP17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 DLGAP2Q9P1A6 1054 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 CASZ1Q86V15 1759 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 BUB1O43683 1085 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 PRLRP16471 622 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 CYP7A1P22680 504 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 PCK1P35558 622 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 RNASELQ05823 741 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 SF3B3Q15393 1217 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 APOA5Q6Q788 366 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 SH3RF1Q7Z6J0 888 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 TRIM42Q8IWZ5 723 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 LY9Q9HBG7 655 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 TSKSQ9UJT2 592 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 CCNL1Q9UK58 526 aaPredicted RBP17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 CD2APQ9Y5K6 639 aa17.18■□□□□ 0.34
CTDSP1-201ENST00000273062 PARP1P09874 1014 aaKnown RBP17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 C4AP0C0L4 1744 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 C4BP0C0L5 1744 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 MSH2P43246 934 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 METAP2P50579 478 aaKnown RBP eCLIP17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 KANK3Q6NY19 840 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 PIGWQ7Z7B1 504 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 TEX9Q8N6V9 391 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 UCMAQ8WVF2 138 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 IFIH1Q9BYX4 1025 aaKnown RBP17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 PHACTR1Q9C0D0 580 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 TTYH3Q9C0H2 523 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 PNMA3Q9UL41 463 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 PNMA2Q9UL42 364 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 JAG2Q9Y219 1238 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 HGSO14964 777 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 TMEM67Q5HYA8 995 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 LRIG3Q6UXM1 1119 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 KLHL7Q8IXQ5 586 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 ZNF507Q8TCN5 953 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 UBLCP1Q8WVY7 318 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 MAIP1Q8WWC4 291 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 MTMR8Q96EF0 704 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 ANAPC4Q9UJX5 808 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 GDAQ9Y2T3 454 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 ZNF804BA4D1E1 1349 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 BTAF1O14981 1849 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 NKRFO15226 690 aaKnown RBP eCLIP17.17■□□□□ 0.341e-7■■□□□ 11.8
CTDSP1-201ENST00000273062 PMS1P54277 932 aaKnown RBP17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 PAK1Q13153 545 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 BIRC3Q13489 604 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 IFI16Q16666 785 aaKnown RBP17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 TMC4Q7Z404 712 aa17.17■□□□□ 0.34
CTDSP1-201ENST00000273062 ZNF384Q8TF68 577 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms