RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 LGR5O75473 907 aa10.39□□□□□ -0.75
TPM3-201ENST00000271850 TRIM50Q86XT4 487 aa10.39□□□□□ -0.75
TPM3-201ENST00000271850 DHX37Q8IY37 1157 aaKnown RBP10.39□□□□□ -0.75
TPM3-201ENST00000271850 MB21D2Q8IYB1 491 aaPredicted RBP10.39□□□□□ -0.75
TPM3-201ENST00000271850 C7orf31Q8N865 590 aa10.39□□□□□ -0.75
TPM3-201ENST00000271850 IGDCC4Q8TDY8 1250 aa10.39□□□□□ -0.75
TPM3-201ENST00000271850 SPATA33Q96N06 139 aa10.39□□□□□ -0.75
TPM3-201ENST00000271850 MYL10Q9BUA6 226 aa10.39□□□□□ -0.75
TPM3-201ENST00000271850 SUGCTQ9HAC7 445 aa10.39□□□□□ -0.75
TPM3-201ENST00000271850 CD320Q9NPF0 282 aa10.39□□□□□ -0.75
TPM3-201ENST00000271850 SUPT16HQ9Y5B9 1047 aaKnown RBP10.39□□□□□ -0.75
TPM3-201ENST00000271850 SGSM2O43147 1006 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 TREHO43280 583 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 PPFIA4O75335 1185 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 LGALS2P05162 132 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 ERVK-21P61565 698 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 ADAM17P78536 824 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 FAM117BQ6P1L5 589 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 FCHSD1Q86WN1 690 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 CCDC155Q8N6L0 562 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 DBF4BQ8NFT6 615 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 INPP4AQ96PE3 977 aaPredicted RBP10.38□□□□□ -0.75
TPM3-201ENST00000271850 C17orf80Q9BSJ5 609 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 KATNAL1Q9BW62 490 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 ADAM33Q9BZ11 813 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 RNPEPQ9H4A4 650 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 MAP3K20Q9NYL2 800 aaKnown RBP10.38□□□□□ -0.75
TPM3-201ENST00000271850 MTUS1Q9ULD2 1270 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 ATG2AQ2TAZ0 1938 aa10.38□□□□□ -0.75
TPM3-201ENST00000271850 PNMA6FA0A0J9YX94 578 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 ABHD14A-ACY1A0A1B0GW23 586 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.37□□□□□ -0.75
TPM3-201ENST00000271850 GCOM1H8Y6P7 765 aaPredicted RBP10.37□□□□□ -0.75
TPM3-201ENST00000271850 MEIS2O14770 477 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 IFIT3O14879 490 aaKnown RBP10.37□□□□□ -0.75
TPM3-201ENST00000271850 LINC00271P0C7V0 271 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 POLR2MP0CAP2 368 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 SMIM10L2AP0DMW4 78 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 SMIM10L2BP0DMW5 78 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 ICAM3P32942 547 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 KCNJ6P48051 423 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 HTRA4P83105 476 aaPredicted RBP10.37□□□□□ -0.75
TPM3-201ENST00000271850 SKIV2LQ15477 1246 aaKnown RBP10.37□□□□□ -0.75
TPM3-201ENST00000271850 PLEKHG4Q58EX7 1191 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 USP17L6PQ6QN14 398 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 PIBF1Q8WXW3 757 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 RAD9AQ99638 391 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 GPR20Q99678 358 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 EPHX3Q9H6B9 360 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 LY9Q9HBG7 655 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 C11orf16Q9NQ32 467 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 RABGEF1Q9UJ41 708 aa10.37□□□□□ -0.75
TPM3-201ENST00000271850 C5orf42Q9H799 3197 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 SPATA31C2B4DYI2 1134 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 PPP1R3GB7ZBB8 358 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 KIF28PB7ZC32 967 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 H3BRB1 525 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 GTPBP6O43824 516 aaPredicted RBP10.36□□□□□ -0.75
TPM3-201ENST00000271850 PLEKHA8P1O95397 391 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 TGFB3P10600 412 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 CCND2P30279 289 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 THPOP40225 353 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 WTAPQ15007 396 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 NYAP1Q6ZVC0 841 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 CYFIP1Q7L576 1253 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 SAMD3Q8N6K7 520 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 MAP4K1Q92918 833 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 TUT1Q9H6E5 874 aaKnown RBP10.36□□□□□ -0.75
TPM3-201ENST00000271850 RTEL1Q9NZ71 1219 aa10.36□□□□□ -0.75
TPM3-201ENST00000271850 MYO7AQ13402 2215 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.35□□□□□ -0.75
TPM3-201ENST00000271850 C17orf102A2RUQ5 167 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 RSPH10B2B2RC85 870 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 ATP9AO75110 1047 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 PARNO95453 639 aaKnown RBP10.35□□□□□ -0.75
TPM3-201ENST00000271850 CTSHP09668 335 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 RSPH10BP0C881 870 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 IRX6P78412 446 aaPredicted RBP10.35□□□□□ -0.75
TPM3-201ENST00000271850 KCNV1Q6PIU1 500 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 METTL7BQ6UX53 244 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 RUFY4Q6ZNE9 571 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 SKAP1Q86WV1 359 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 ZNF654Q8IZM8 581 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
TPM3-201ENST00000271850 SRBD1Q8N5C6 995 aaKnown RBP10.35□□□□□ -0.75
TPM3-201ENST00000271850 NCOA7Q8NI08 942 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 ATP6V0A1Q93050 837 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 HLA-CQ95604 372 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 ZBTB10Q96DT7 871 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 TGS1Q96RS0 853 aaKnown RBP10.35□□□□□ -0.75
TPM3-201ENST00000271850 LSG1Q9H089 658 aaKnown RBP10.35□□□□□ -0.75
TPM3-201ENST00000271850 RC3H2Q9HBD1 1191 aaKnown RBP10.35□□□□□ -0.75
TPM3-201ENST00000271850 SETD4Q9NVD3 440 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 COG5Q9UP83 839 aa10.35□□□□□ -0.75
TPM3-201ENST00000271850 RBM8AQ9Y5S9 174 aaKnown RBP10.35□□□□□ -0.75
TPM3-201ENST00000271850 hCG_1642624A0A1W2PR95 340 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 PIK3CDO00329 1044 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 SH2B2O14492 632 aaPredicted RBP10.34□□□□□ -0.75
TPM3-201ENST00000271850 CHRNA1P02708 482 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 KCNA2P16389 499 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms