RNA–Protein interactions for RNA: ENST00000269141.7

CDH2-201, Transcript of cadherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH2, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-201ENST00000269141 MRGBPQ9NV56 204 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 ZNF711Q9Y462 761 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 IVNS1ABPQ9Y6Y0 642 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 SFI1A8K8P3 1242 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 FOXP2O15409 715 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 TRAPPC10P48553 1259 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 ZNF543Q08ER8 600 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 SLMAPQ14BN4 828 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 CRY2Q49AN0 593 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 RCSD1Q6JBY9 416 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 KRT26Q7Z3Y9 468 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 KCTD17Q8N5Z5 321 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 GBP5Q96PP8 586 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 GDAQ9Y2T3 454 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 IFT88Q13099 833 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 NTRK3Q16288 839 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 THEMIS2Q5TEJ8 643 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 APOBEC3HQ6NTF7 200 aaKnown RBP12.23□□□□□ -0.45
CDH2-201ENST00000269141 STXBP4Q6ZWJ1 553 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 MIER3Q7Z3K6 550 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 CCDC150Q8NCX0 1101 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 OTUD5Q96G74 571 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 KLC4Q9NSK0 619 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDH2-201ENST00000269141 CNTNAP5Q8WYK1 1306 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 BICDL2A1A5D9 508 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 CTAGE15A4D2H0 777 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 CTAGE8P0CG41 777 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 CTAGE6Q86UF2 777 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 CTAGE4Q8IX94 777 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 ZKSCAN4Q969J2 545 aaPredicted RBP12.23□□□□□ -0.45
CDH2-201ENST00000269141 FAM207AQ9NSI2 230 aaPredicted RBP12.23□□□□□ -0.45
CDH2-201ENST00000269141 SERPINA10Q9UK55 444 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 MAN1B1Q9UKM7 699 aa12.23□□□□□ -0.45
CDH2-201ENST00000269141 NOP56O00567 594 aaKnown RBP12.22□□□□□ -0.45
CDH2-201ENST00000269141 TUBB4AP04350 444 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 STAT3P40763 770 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 SF3A3Q12874 501 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDH2-201ENST00000269141 MTMR2Q13614 643 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 CUL4BQ13620 913 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 RAPGEF1Q13905 1077 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 SHROOM1Q2M3G4 852 aaPredicted RBP12.22□□□□□ -0.45
CDH2-201ENST00000269141 CLEC17AQ6ZS10 378 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 CCDC170Q8IYT3 715 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 FAM71BQ8TC56 605 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 PIGOQ8TEQ8 1089 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 FBXO41Q8TF61 875 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 USP6NLQ92738 828 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 RGL1Q9NZL6 768 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 DACT2Q5SW24 774 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 TRIM58Q8NG06 486 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 MTA3Q9BTC8 594 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 MMADHCQ9H3L0 296 aaPredicted RBP12.22□□□□□ -0.45
CDH2-201ENST00000269141 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
CDH2-201ENST00000269141 LUC7L2Q9Y383 392 aaKnown RBP12.22□□□□□ -0.45
CDH2-201ENST00000269141 MYO1FO00160 1098 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 GKAP1Q5VSY0 366 aaPredicted RBP12.22□□□□□ -0.45
CDH2-201ENST00000269141 LARP4BQ92615 738 aaKnown RBP12.22□□□□□ -0.45
CDH2-201ENST00000269141 PAGE5Q96GU1 130 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 ZNF577Q9BSK1 485 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 PCDHA6Q9UN73 950 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 PCDHA8Q9Y5H6 950 aa12.22□□□□□ -0.45
CDH2-201ENST00000269141 STRCQ7RTU9 1775 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 ATP6V1G1O75348 118 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 LUC7L3O95232 432 aaKnown RBP12.21□□□□□ -0.45
CDH2-201ENST00000269141 CTTNQ14247 550 aaKnown RBP12.21□□□□□ -0.45
CDH2-201ENST00000269141 ARID5BQ14865 1188 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 GLG1Q92896 1179 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 ZDHHC15Q96MV8 337 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 NAP1L4Q99733 375 aaKnown RBP12.21□□□□□ -0.45
CDH2-201ENST00000269141 PHF20Q9BVI0 1012 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 NLRC4Q9NPP4 1024 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 AFDNP55196 1824 aaKnown RBP12.21□□□□□ -0.45
CDH2-201ENST00000269141 EFCAB8A8MWE9 144 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 RHBDL3P58872 404 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 ZNF384Q8TF68 577 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 CAPS2Q9BXY5 557 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 UTP6Q9NYH9 597 aaKnown RBP12.21□□□□□ -0.45
CDH2-201ENST00000269141 MAD2L2Q9UI95 211 aa12.21□□□□□ -0.45
CDH2-201ENST00000269141 GTPBP6O43824 516 aaPredicted RBP12.21□□□□□ -0.46
CDH2-201ENST00000269141 KRT9P35527 623 aa12.21□□□□□ -0.46
CDH2-201ENST00000269141 EARS2Q5JPH6 523 aaKnown RBP12.21□□□□□ -0.46
CDH2-201ENST00000269141 RESP18Q5W5W9 173 aa12.21□□□□□ -0.46
CDH2-201ENST00000269141 CPLX4Q7Z7G2 160 aa12.21□□□□□ -0.46
CDH2-201ENST00000269141 AGXT2Q9BYV1 514 aa12.21□□□□□ -0.46
CDH2-201ENST00000269141 EPC1Q9H2F5 836 aa12.21□□□□□ -0.46
CDH2-201ENST00000269141 TMEM60Q9H2L4 133 aa12.21□□□□□ -0.46
CDH2-201ENST00000269141 LUC7LQ9NQ29 371 aaKnown RBP12.21□□□□□ -0.46
CDH2-201ENST00000269141 HACL1Q9UJ83 578 aa12.21□□□□□ -0.46
CDH2-201ENST00000269141 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
CDH2-201ENST00000269141 DDNO94850 711 aaPredicted RBP12.2□□□□□ -0.46
CDH2-201ENST00000269141 VIMP08670 466 aaKnown RBP12.2□□□□□ -0.46
CDH2-201ENST00000269141 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
CDH2-201ENST00000269141 ZC3H12AQ5D1E8 599 aaKnown RBP12.2□□□□□ -0.46
CDH2-201ENST00000269141 FOXR1Q6PIV2 292 aa12.2□□□□□ -0.46
CDH2-201ENST00000269141 FBF1Q8TES7 1133 aa12.2□□□□□ -0.46
CDH2-201ENST00000269141 FAM151AQ8WW52 585 aa12.2□□□□□ -0.46
CDH2-201ENST00000269141 TCP11Q8WWU5 503 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms