RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ZKSCAN5Q9Y2L8 839 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 UBIAD1Q9Y5Z9 338 aa17.15■□□□□ 0.34
COPS3-201ENST00000268717 MCM6Q14566 821 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 ECM1Q16610 540 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 LRCH2Q5VUJ6 765 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 B3GNT9Q6UX72 402 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 CHST13Q8NET6 341 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 ACAD9Q9H845 621 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 TUFT1Q9NNX1 390 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 MYMKA6NI61 221 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 MED24O75448 989 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 STAT3P40763 770 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 PSMD2Q13200 908 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 NCAPH2Q6IBW4 605 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 KCNK18Q7Z418 384 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 NEK9Q8TD19 979 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 DHTKD1Q96HY7 919 aaPredicted RBP17.14■□□□□ 0.33
COPS3-201ENST00000268717 ZNF577Q9BSK1 485 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 PXMP2Q9NR77 195 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 HOMER2Q9NSB8 354 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 BMP2KQ9NSY1 1161 aaPredicted RBP17.14■□□□□ 0.33
COPS3-201ENST00000268717 IMPACTQ9P2X3 320 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 KIAA1024Q9UPX6 916 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 PTCH2Q9Y6C5 1203 aa17.14■□□□□ 0.33
COPS3-201ENST00000268717 KIAA0100Q14667 2235 aaKnown RBP17.13■□□□□ 0.33
COPS3-201ENST00000268717 BRCA2P51587 3418 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 A0A0G2JMZ2 1700 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 POTEB3A0JP26 581 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 GAS7O60861 476 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 SPATA31C1P0DKV0 1188 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 ITGB5P18084 799 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 PRMT2P55345 433 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 FCGRTP55899 365 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 HERVK_113P62684 666 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 EHHADHQ08426 723 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 PGM5Q15124 567 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 CDKAL1Q5VV42 579 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 POTEBQ6S5H4 581 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 SLC30A10Q6XR72 485 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 CATSPER3Q86XQ3 398 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 UIMC1Q96RL1 719 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 PDCD2LQ9BRP1 358 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 TEKT3Q9BXF9 490 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 XPO4Q9C0E2 1151 aaKnown RBP17.13■□□□□ 0.33
COPS3-201ENST00000268717 JADE2Q9NQC1 790 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 IFNKQ9P0W0 207 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 SRRDQ9UH36 339 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 FBXO40Q9UH90 709 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 RIPK3Q9Y572 518 aa17.13■□□□□ 0.33
COPS3-201ENST00000268717 IPO5O00410 1097 aaKnown RBP17.12■□□□□ 0.33
COPS3-201ENST00000268717 PSMA7O14818 248 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 PLA2G4BP0C869 781 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 ATP1A3P13637 1013 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 HOXD10P28358 340 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 PRCPP42785 496 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 PDE4DQ08499 809 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 FOXR2Q6PJQ5 311 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 DRC7Q8IY82 874 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 SMYD4Q8IYR2 804 aaPredicted RBP17.12■□□□□ 0.33
COPS3-201ENST00000268717 DDX12PQ92771 950 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 TAAR1Q96RJ0 339 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 RMDN3Q96TC7 470 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 HSD17B14Q9BPX1 270 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 EIF2AK1Q9BQI3 630 aaKnown RBP17.12■□□□□ 0.33
COPS3-201ENST00000268717 MORF4L1Q9UBU8 362 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 DNM3Q9UQ16 869 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 CTNND2Q9UQB3 1225 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 GDAQ9Y2T3 454 aa17.12■□□□□ 0.33
COPS3-201ENST00000268717 MAFGO15525 162 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 STAM2O75886 525 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 SERPINC1P01008 464 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 MSNP26038 577 aaKnown RBP17.11■□□□□ 0.33
COPS3-201ENST00000268717 SLC12A3P55017 1021 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 UBASH3AP57075 661 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 UBXN2AP68543 259 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 MRPS9P82933 396 aaKnown RBP17.11■□□□□ 0.33
COPS3-201ENST00000268717 SPAG1Q07617 926 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 BAATQ14032 418 aaPredicted RBP17.11■□□□□ 0.33
COPS3-201ENST00000268717 EPHA7Q15375 998 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 KLHL10Q6JEL2 608 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 NSMFQ6X4W1 530 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.11■□□□□ 0.33
COPS3-201ENST00000268717 RIOX2Q8IUF8 465 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 TRMT44Q8IYL2 757 aaKnown RBP17.11■□□□□ 0.33
COPS3-201ENST00000268717 SPC24Q8NBT2 197 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 GTF3C2Q8WUA4 911 aaPredicted RBP17.11■□□□□ 0.33
COPS3-201ENST00000268717 NELFBQ8WX92 580 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 CTAGE1Q96RT6 745 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 KCNH7Q9NS40 1196 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 TBC1D22BQ9NU19 505 aa17.11■□□□□ 0.33
COPS3-201ENST00000268717 BICDL2A1A5D9 508 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 ARP10275 920 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 COPB2P35606 906 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 GSDMDP57764 484 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 ARHGEF16Q5VV41 709 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 SYT2Q8N9I0 419 aaPredicted RBP17.1■□□□□ 0.33
COPS3-201ENST00000268717 IL31RAQ8NI17 732 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 NSUN6Q8TEA1 469 aaKnown RBP17.1■□□□□ 0.33
COPS3-201ENST00000268717 NOC3LQ8WTT2 800 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms