RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 CYP3A7-CYP3A51PA0A087WV96 503 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 GH2P01242 217 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 CYP11B2P19099 503 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 CYP3A7P24462 503 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 KIF11P52732 1056 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 VSNL1P62760 191 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 HERC4Q5GLZ8 1057 aaPredicted RBP14.27□□□□□ -0.13
CPSF6-201ENST00000266679 CC2D2BQ6DHV5 1058 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 FBXO11Q86XK2 927 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 SLFN12Q8IYM2 578 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 MBOAT7Q96N66 472 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 MRIQ9BWK5 157 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 SERPINA10Q9UK55 444 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 PLAGL2Q9UPG8 496 aa14.27□□□□□ -0.13
CPSF6-201ENST00000266679 HNRNPH3P31942 346 aaKnown RBP14.26□□□□□ -0.13
CPSF6-201ENST00000266679 FKBP3Q00688 224 aaKnown RBP14.26□□□□□ -0.13
CPSF6-201ENST00000266679 KIF5AQ12840 1032 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 PDXDC1Q6P996 788 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 CCDC84Q86UT8 332 aaPredicted RBP14.26□□□□□ -0.13
CPSF6-201ENST00000266679 GMCL1P1Q8NEA9 526 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 ETNPPLQ8TBG4 499 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
CPSF6-201ENST00000266679 MEIS1O00470 390 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 TUBB4BP68371 445 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 SMC1AQ14683 1233 aaKnown RBP14.26□□□□□ -0.13
CPSF6-201ENST00000266679 BEND6Q5SZJ8 279 aaPredicted RBP14.26□□□□□ -0.13
CPSF6-201ENST00000266679 PAPD7Q5XG87 772 aaKnown RBP14.26□□□□□ -0.13
CPSF6-201ENST00000266679 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 CACNA2D4Q7Z3S7 1137 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 BAP1Q92560 729 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 PURBQ96QR8 312 aaKnown RBP14.26□□□□□ -0.13
CPSF6-201ENST00000266679 MMS19Q96T76 1030 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 IFIH1Q9BYX4 1025 aaKnown RBP14.26□□□□□ -0.13
CPSF6-201ENST00000266679 UBXN6Q9BZV1 441 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 TSGA10Q9BZW7 698 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 MLXIPQ9HAP2 919 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 ABCB6Q9NP58 842 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 PCDHA2Q9Y5H9 948 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 PCDHA13Q9Y5I0 950 aa14.26□□□□□ -0.13
CPSF6-201ENST00000266679 IQCA1LA6NCM1 817 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 SPDYE3A6NKU9 549 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 AKR1B10O60218 316 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 ERLIN1O75477 346 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 BMP3P12645 472 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 HOXA13P31271 388 aaPredicted RBP14.25□□□□□ -0.13
CPSF6-201ENST00000266679 SLC12A3P55017 1021 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 KCNMA1Q12791 1236 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 RRP1BQ14684 758 aaKnown RBP14.25□□□□□ -0.13
CPSF6-201ENST00000266679 RBM26Q5T8P6 1007 aaKnown RBP14.25□□□□□ -0.13
CPSF6-201ENST00000266679 HAUS3Q68CZ6 603 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 MOXD1Q6UVY6 613 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 SPICE1Q8N0Z3 855 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 CAGE1Q8TC20 777 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 KLRG1Q96E93 195 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 GMCL1Q96IK5 515 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 LSM14BQ9BX40 385 aaKnown RBP14.25□□□□□ -0.13
CPSF6-201ENST00000266679 NLRC4Q9NPP4 1024 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 HACL1Q9UJ83 578 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 EPHX2P34913 555 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 ARSHQ5FYA8 562 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 FOXR2Q6PJQ5 311 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 NIM1KQ8IY84 436 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 GPC2Q8N158 579 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 ERMNQ8TAM6 284 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 SCFD1Q8WVM8 642 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 HNRNPLLQ8WVV9 542 aaKnown RBP14.25□□□□□ -0.13
CPSF6-201ENST00000266679 CRYGNQ8WXF5 182 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 ZBTB9Q96C00 473 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 DRC1Q96MC2 740 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 CEP63Q96MT8 703 aa14.25□□□□□ -0.13
CPSF6-201ENST00000266679 SMCHD1A6NHR9 2005 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 ATAD5Q96QE3 1844 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 FAM86B1E9PN63 330 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 ZNF185O15231 689 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 SLC26A4O43511 780 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 USO1O60763 962 aaKnown RBP14.24□□□□□ -0.13
CPSF6-201ENST00000266679 NPM3O75607 178 aaKnown RBP14.24□□□□□ -0.13
CPSF6-201ENST00000266679 MOCS3O95396 460 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 FAM86B2P0C5J1 330 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 PSMC6P62333 389 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 CKAP4Q07065 602 aaKnown RBP14.24□□□□□ -0.13
CPSF6-201ENST00000266679 SPIRE1Q08AE8 756 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 PABPC4Q13310 644 aaKnown RBP eCLIP14.24□□□□□ -0.132e-6■□□□□ 9.6
CPSF6-201ENST00000266679 CATSPER3Q86XQ3 398 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 LENG9Q96B70 501 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 CSRNP1Q96S65 589 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 KCTD10Q9H3F6 313 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 SH2D4AQ9H788 454 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 SUGCTQ9HAC7 445 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 EMILIN3Q9NT22 766 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 CAPN6Q9Y6Q1 641 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 ATRNL1Q5VV63 1379 aa14.24□□□□□ -0.13
CPSF6-201ENST00000266679 A0A1W2PRG0 241 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 MAP2K7O14733 419 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 SREBF1P36956 1147 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 Q4G0T1 1027 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 PRMT6Q96LA8 375 aaPredicted RBP14.23□□□□□ -0.13
CPSF6-201ENST00000266679 CRACR2AQ9BSW2 395 aa14.23□□□□□ -0.13
CPSF6-201ENST00000266679 JADE2Q9NQC1 790 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms