RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PIGWQ7Z7B1 504 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 RBM17Q96I25 401 aaKnown RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 CABP5Q9NP86 173 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 HELLSQ9NRZ9 838 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 TFCP2L1Q9NZI6 479 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 DLGAP2Q9P1A6 1054 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 ITGB4P16144 1822 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 AHDC1Q5TGY3 1603 aaPredicted RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 DOT1LQ8TEK3 1739 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 OATP04181 439 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 GNAZP19086 355 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 ALDH3A1P30838 453 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 MAGEA8P43361 318 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 IFNAR2P48551 515 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 RRP12Q5JTH9 1297 aaKnown RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 APOA5Q6Q788 366 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 FAM47EQ6ZV65 393 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 TBC1D10CQ8IV04 446 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 ATXN2LQ8WWM7 1075 aaKnown RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 IFIH1Q9BYX4 1025 aaKnown RBP9.6□□□□□ -0.87
VAPB-201ENST00000265619 FAM129AQ9BZQ8 928 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 TRIM4Q9C037 500 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 GOLPH3Q9H4A6 298 aa9.6□□□□□ -0.87
VAPB-201ENST00000265619 PLCH1Q4KWH8 1693 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 LGALS16A8MUM7 142 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 FUT4P22083 530 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 CYLC1P35663 651 aaPredicted RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 BCAMP50895 628 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 INHBCP55103 352 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 RASSF7Q02833 373 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 PAK1Q13153 545 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 CUL3Q13618 768 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 TRIM14Q14142 442 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 PLS1Q14651 629 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 LRRC23Q53EV4 343 aaPredicted RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 OR52E8Q6IFG1 317 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 CCHCR1Q8TD31 782 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 ARHGEF1Q92888 912 aaKnown RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 PHACTR1Q9C0D0 580 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 PUS7LQ9H0K6 701 aaKnown RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.59□□□□□ -0.87
VAPB-201ENST00000265619 LRRD1A4D1F6 860 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 GOLGA6L10A6NI86 522 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 TACC1O75410 805 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 CNGA1P29973 690 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 GYG1P46976 350 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 KRT27Q7Z3Y8 459 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 DNAAF5Q86Y56 855 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 RBM12BQ8IXT5 1001 aaKnown RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 C1orf131Q8NDD1 294 aaKnown RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 ZFAND2BQ8WV99 257 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 IFT43Q96FT9 208 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 SLX1AQ9BQ83 275 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 APBA3O96018 575 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 TRIM21P19474 475 aaKnown RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 IARSP41252 1262 aaKnown RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 MSH2P43246 934 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 CCDC152Q4G0S7 254 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 TRAPPC3LQ5T215 181 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 ARFGAP2Q8N6H7 521 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 MIGA1Q8NAN2 632 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 SUPT20HQ8NEM7 779 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 RUBCNQ92622 972 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 PRMT1Q99873 361 aaKnown RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 MMTAG2Q9BU76 263 aaKnown RBP9.59□□□□□ -0.87
VAPB-201ENST00000265619 AATFQ9NY61 560 aaKnown RBP eCLIP9.59□□□□□ -0.87
VAPB-201ENST00000265619 RWDD2AQ9UIY3 292 aa9.59□□□□□ -0.87
VAPB-201ENST00000265619 hCG_1642624A0A1W2PR95 340 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 SART1O43290 800 aaKnown RBP9.58□□□□□ -0.88
VAPB-201ENST00000265619 NPTXRO95502 500 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 MMP1P03956 469 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 MMEP08473 750 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 EIF4A3P38919 411 aaKnown RBP9.58□□□□□ -0.88
VAPB-201ENST00000265619 PAFAH1B1P43034 410 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 ANKLE1Q8NAG6 615 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 ARFGEF2Q9Y6D5 1785 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 SMIM23A6NLE4 172 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 B4E1Z4 1266 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 GSTA1P08263 222 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 TCP1P17987 556 aaKnown RBP9.58□□□□□ -0.88
VAPB-201ENST00000265619 GFPT1Q06210 699 aaPredicted RBP9.58□□□□□ -0.88
VAPB-201ENST00000265619 KRT71Q3SY84 523 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 PABPC1LQ4VXU2 614 aaKnown RBP9.58□□□□□ -0.88
VAPB-201ENST00000265619 GALNT17Q6IS24 598 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 TAX1BP1Q86VP1 789 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 CCNJLQ8IV13 435 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 UBAC1Q9BSL1 405 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 FOXO6A8MYZ6 492 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 H0Y3Z8 333 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 RNF113AO15541 343 aaKnown RBP9.58□□□□□ -0.88
VAPB-201ENST00000265619 PRLRP16471 622 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 IFI35P80217 286 aaPredicted RBP9.58□□□□□ -0.88
VAPB-201ENST00000265619 C2CD5Q86YS7 1000 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 GSDMAQ96QA5 445 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 TMX4Q9H1E5 349 aaPredicted RBP9.58□□□□□ -0.88
VAPB-201ENST00000265619 LRRC4BQ9NT99 713 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 ANKIB1Q9P2G1 1089 aa9.58□□□□□ -0.88
VAPB-201ENST00000265619 ANGEL1Q9UNK9 670 aaKnown RBP9.58□□□□□ -0.88
VAPB-201ENST00000265619 TACC3Q9Y6A5 838 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms