RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TTC12Q9H892 705 aaPredicted RBP16.11■□□□□ 0.17
SSBP1-201ENST00000265304 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
SSBP1-201ENST00000265304 SRPRBQ9Y5M8 271 aaKnown RBP16.11■□□□□ 0.17
SSBP1-201ENST00000265304 ELP1O95163 1332 aa16.11■□□□□ 0.17
SSBP1-201ENST00000265304 KCNA4P22459 653 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 PTGS1P23219 599 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 CPT1AP50416 773 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 JAK3P52333 1124 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 ACTR2P61160 394 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 DNM1Q05193 864 aaKnown RBP16.1■□□□□ 0.17
SSBP1-201ENST00000265304 LRRC41Q15345 812 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 FSCN1Q16658 493 aaKnown RBP16.1■□□□□ 0.17
SSBP1-201ENST00000265304 OR6J1Q8NGC5 347 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 AFG1LQ8WV93 481 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 FERMT2Q96AC1 680 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 LENG1Q96BZ8 264 aaPredicted RBP16.1■□□□□ 0.17
SSBP1-201ENST00000265304 SPATA33Q96N06 139 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 HSD17B14Q9BPX1 270 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
SSBP1-201ENST00000265304 SPC25Q9HBM1 224 aa16.1■□□□□ 0.17
SSBP1-201ENST00000265304 LOXHD1Q8IVV2 1947 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 TRIP12Q14669 1992 aaPredicted RBP16.09■□□□□ 0.17
SSBP1-201ENST00000265304 WDR64B1ANS9 1081 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 DNM1LO00429 736 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 SLC26A4O43511 780 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 MMP3P08254 477 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 FOXD4L5Q5VV16 416 aaPredicted RBP16.09■□□□□ 0.17
SSBP1-201ENST00000265304 PLPPR4Q7Z2D5 763 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 RNF180Q86T96 592 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 KCTD17Q8N5Z5 321 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 PCSK9Q8NBP7 692 aaKnown RBP16.09■□□□□ 0.17
SSBP1-201ENST00000265304 AFAP1L1Q8TED9 768 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 FOXD4L4Q8WXT5 416 aaPredicted RBP16.09■□□□□ 0.17
SSBP1-201ENST00000265304 GJA10Q969M2 543 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 AK8Q96MA6 479 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 PCYT2Q99447 389 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 C16orf70Q9BSU1 422 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 UNC45AQ9H3U1 944 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 TFIP11Q9UBB9 837 aaKnown RBP16.09■□□□□ 0.17
SSBP1-201ENST00000265304 FBXO2Q9UK22 296 aaPredicted RBP16.09■□□□□ 0.17
SSBP1-201ENST00000265304 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 TELO2Q9Y4R8 837 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 PCDHA10Q9Y5I2 948 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 EMSYQ7Z589 1322 aa16.09■□□□□ 0.17
SSBP1-201ENST00000265304 MYADML2A6NDP7 307 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 MOXD2PA6NHM9 499 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 HAS3O00219 553 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 EML1O00423 815 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 PGK1P00558 417 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 COL6A1P12109 1028 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 MUTP22033 750 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 TXKP42681 527 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 KRT85P78386 507 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 PURAQ00577 322 aaKnown RBP16.08■□□□□ 0.16
SSBP1-201ENST00000265304 EPHA7Q15375 998 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 DGKDQ16760 1214 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 BRDTQ58F21 947 aaPredicted RBP16.08■□□□□ 0.16
SSBP1-201ENST00000265304 GNASQ5JWF2 1037 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 DTHD1Q6ZMT9 781 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 UBE2Q1Q7Z7E8 422 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 ZNF579Q8NAF0 562 aaKnown RBP16.08■□□□□ 0.16
SSBP1-201ENST00000265304 KCNG4Q8TDN1 519 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
SSBP1-201ENST00000265304 DISC1Q9NRI5 854 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 MAFBQ9Y5Q3 323 aaPredicted RBP16.08■□□□□ 0.16
SSBP1-201ENST00000265304 STK24Q9Y6E0 443 aa16.08■□□□□ 0.16
SSBP1-201ENST00000265304 SPTLC2O15270 562 aa16.07■□□□□ 0.16
SSBP1-201ENST00000265304 CABYRO75952 493 aa16.07■□□□□ 0.16
SSBP1-201ENST00000265304 LYPLA2O95372 231 aa16.07■□□□□ 0.16
SSBP1-201ENST00000265304 F2P00734 622 aa16.07■□□□□ 0.16
SSBP1-201ENST00000265304 C6orf222P0C671 652 aaPredicted RBP16.07■□□□□ 0.16
SSBP1-201ENST00000265304 SUPT20HL2P0C7V6 817 aa16.07■□□□□ 0.16
SSBP1-201ENST00000265304 LONP1P36776 959 aaKnown RBP16.07■□□□□ 0.16
SSBP1-201ENST00000265304 SLC26A2P50443 739 aa16.07■□□□□ 0.16
SSBP1-201ENST00000265304 IRX5P78411 483 aaPredicted RBP16.07■□□□□ 0.16
SSBP1-201ENST00000265304 AXDND1Q5T1B0 1012 aaPredicted RBP16.07■□□□□ 0.16
SSBP1-201ENST00000265304 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
SSBP1-201ENST00000265304 KAT2BQ92831 832 aa16.07■□□□□ 0.16
SSBP1-201ENST00000265304 ABHD8Q96I13 439 aa16.07■□□□□ 0.16
SSBP1-201ENST00000265304 TMEM106CQ9BVX2 250 aa16.07■□□□□ 0.16
SSBP1-201ENST00000265304 SEZ6LQ9BYH1 1024 aa16.07■□□□□ 0.16
SSBP1-201ENST00000265304 IGSF9BQ9UPX0 1349 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 ZEB2O60315 1214 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 TCF7P36402 384 aaPredicted RBP16.06■□□□□ 0.16
SSBP1-201ENST00000265304 KCNA10Q16322 511 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 HYIQ5T013 277 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 MIS18BP1Q6P0N0 1132 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 SLC43A3Q8NBI5 491 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 NEK9Q8TD19 979 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 TNPO1Q92973 898 aaKnown RBP16.06■□□□□ 0.16
SSBP1-201ENST00000265304 POLR3CQ9BUI4 534 aaPredicted RBP16.06■□□□□ 0.16
SSBP1-201ENST00000265304 RAB34Q9BZG1 259 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 SMARCAD1Q9H4L7 1026 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 PKD2L1Q9P0L9 805 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 EVPLQ92817 2033 aa16.06■□□□□ 0.16
SSBP1-201ENST00000265304 DNAH12Q6ZR08 3092 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 NOP56O00567 594 aaKnown RBP16.05■□□□□ 0.16
SSBP1-201ENST00000265304 MARCH6O60337 910 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 SLITRK3O94933 977 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 STBD1O95210 358 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms