RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 KIF22Q14807 665 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 B3GNT9Q6UX72 402 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 MAMDC4Q6UXC1 1216 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 KCNK18Q7Z418 384 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 ZNF467Q7Z7K2 595 aaPredicted RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 RASSF8Q8NHQ8 419 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 ZNF296Q8WUU4 475 aaPredicted RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 DYDC2Q96IM9 177 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 EIF2AK1Q9BQI3 630 aaKnown RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 CCSER1Q9C0I3 900 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 SLC5A4Q9NY91 659 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 DDX41Q9UJV9 622 aaKnown RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 WDR81Q562E7 1941 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 CEP350Q5VT06 3117 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 ACTN4O43707 911 aaKnown RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 KINO60870 393 aaKnown RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 SPATA31C1P0DKV0 1188 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 TXNP10599 105 aaKnown RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 PLCG1P19174 1290 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 CASP1P29466 404 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 ADCYAP1R1P41586 468 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 TRIM32Q13049 653 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 E2F4Q16254 413 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 NAALADL2Q58DX5 795 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 KRT79Q5XKE5 535 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 KRBA2Q6ZNG9 492 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 MIER3Q7Z3K6 550 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 CATSPER3Q86XQ3 398 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 BANK1Q8NDB2 785 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 SOCS4Q8WXH5 440 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 MS4A3Q96HJ5 214 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 CDHR1Q96JP9 859 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 APBA2Q99767 749 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 SDF4Q9BRK5 362 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 RAB34Q9BZG1 259 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 CLSTN2Q9H4D0 955 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 DISC1Q9NRI5 854 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 TBC1D22BQ9NU19 505 aa10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 ZHX1Q9UKY1 873 aaPredicted RBP10.94□□□□□ -0.66
SNRNP40-201ENST00000263694 SYNGAP1Q96PV0 1343 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 LOC102724159A0A0B4J2E5 919 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 POTEFA5A3E0 1075 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 E9PMD0 336 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 ZBTB39O15060 712 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 ADCY6O43306 1168 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 FKTNO75072 461 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 SLITRK3O94933 977 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 GGPS1O95749 300 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 ELNP15502 786 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 TXLNAP40222 546 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 AFMP43652 599 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 PSMC6P62333 389 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 MAP2K1Q02750 393 aaPredicted RBP10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 ACVR2BQ13705 512 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 DHX8Q14562 1220 aaKnown RBP10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 PWP2Q15269 919 aaKnown RBP10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 RRAGBQ5VZM2 374 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 CCDC62Q6P9F0 684 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 TRMT1LQ7Z2T5 733 aaKnown RBP10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 TPH2Q8IWU9 490 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 CKAP2LQ8IYA6 745 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 TRIB2Q92519 343 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 NUP62CLQ9H1M0 184 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 DDX19AQ9NUU7 478 aaKnown RBP10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 SAGE1Q9NXZ1 904 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 WRAP73Q9P2S5 460 aaPredicted RBP10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 SLC9A2Q9UBY0 812 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 KIAA1024Q9UPX6 916 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 SAMM50Q9Y512 469 aa10.93□□□□□ -0.66
SNRNP40-201ENST00000263694 NFASCO94856 1347 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 STAT6P42226 847 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 ACTR2P61160 394 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 PNOCQ13519 176 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 EPHA7Q15375 998 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 UGCGQ16739 394 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 CCDC144BQ3MJ40 725 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 TMEM119Q4V9L6 283 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 CCDC183Q5T5S1 534 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 PDXDC2PQ6P474 469 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 CNNM3Q8NE01 707 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 LENG1Q96BZ8 264 aaPredicted RBP10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 CALML4Q96GE6 196 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 CDK5RAP3Q96JB5 506 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 MTRQ99707 1265 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 HSD17B14Q9BPX1 270 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 BEGAINQ9BUH8 593 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 TNMDQ9H2S6 317 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 JPH1Q9HDC5 661 aaPredicted RBP10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 VTA1Q9NP79 307 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 BLOC1S4Q9NUP1 217 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 WBP1LQ9NX94 342 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 CCDC39Q9UFE4 941 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 SRRDQ9UH36 339 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 CASP8AP2Q9UKL3 1982 aa10.92□□□□□ -0.66
SNRNP40-201ENST00000263694 RBM47A0AV96 593 aaKnown RBP10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 SYCE3A1L190 88 aa10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 FARP2O94887 1054 aaPredicted RBP10.91□□□□□ -0.66
SNRNP40-201ENST00000263694 IGHA2P01877 340 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms