RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ECE2O60344 883 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 USP17L8P0C7I0 530 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 AFMP43652 599 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 IFI16Q16666 785 aaKnown RBP9.11□□□□□ -0.95
LDB3-201ENST00000263066 NUGGCQ68CJ6 796 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 DAAM2Q86T65 1068 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 SIX5Q8N196 739 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 FAM133AQ8N9E0 248 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 SLC44A5Q8NCS7 719 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 SLC17A8Q8NDX2 589 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 NDEL1Q9GZM8 345 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 CD209Q9NNX6 404 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 TXNDC9O14530 226 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 MLH1P40692 756 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 PDE4BQ07343 736 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 ADCY1Q08828 1119 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 BLMHQ13867 455 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 YTHDF3Q7Z739 585 aaKnown RBP9.11□□□□□ -0.95
LDB3-201ENST00000263066 ERICH1Q86X53 443 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 MTFR1LQ9H019 292 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 ECT2Q9H8V3 914 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 PANK4Q9NVE7 773 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 DAAM1Q9Y4D1 1078 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 HMGB1P1B2RPK0 211 aaPredicted RBP9.11□□□□□ -0.95
LDB3-201ENST00000263066 IKBKBO14920 756 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 AKR1B10O60218 316 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 GOLGA8HP0CJ92 632 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 TROVE2P10155 538 aaKnown RBP eCLIP9.11□□□□□ -0.95
LDB3-201ENST00000263066 PFKFB1P16118 471 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 PDE6CP51160 858 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 CLCN2P51788 898 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 ADALQ6DHV7 355 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 RAD9BQ6WBX8 426 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 KCNK9Q9NPC2 374 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 ZNF180Q9UJW8 692 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 TNS2Q63HR2 1409 aa9.11□□□□□ -0.95
LDB3-201ENST00000263066 A0A0U1RQJ8 604 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 CFAP73A6NFT4 308 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 GOLGA8AA7E2F4 631 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 IGF2BP3O00425 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
LDB3-201ENST00000263066 SHOX2O60902 331 aaPredicted RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 KRT38O76015 456 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 MSH2P43246 934 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 TMED10P49755 219 aaKnown RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 PSMD7P51665 324 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 TMEM62Q0P6H9 643 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 SAFBQ15424 915 aaKnown RBP eCLIP9.1□□□□□ -0.95
LDB3-201ENST00000263066 CIAPIN1Q6FI81 312 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 EMBQ6PCB8 327 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.1□□□□□ -0.95
LDB3-201ENST00000263066 ATP6V1G3Q96LB4 118 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 LRRC1Q9BTT6 524 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.1□□□□□ -0.95
LDB3-201ENST00000263066 SLC26A6Q9BXS9 759 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 UBE2OQ9C0C9 1292 aaKnown RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 BRD8Q9H0E9 1235 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 ABCC12Q96J65 1359 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 IPO5O00410 1097 aaKnown RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 LDHAP00338 332 aaKnown RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 ATP1A1P05023 1023 aaKnown RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 CYP2D6P10635 497 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 GSTT1P30711 240 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 PPARAQ07869 468 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 KRT32Q14532 448 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 RC3H1Q5TC82 1133 aaKnown RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 TC2NQ8N9U0 490 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 TBC1D16Q8TBP0 767 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 FAM84BQ96KN1 310 aaPredicted RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 RAB3IPQ96QF0 476 aaPredicted RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 TRIM31Q9BZY9 425 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 DRC3Q9H069 523 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 ZHX3Q9H4I2 956 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 PKD2L1Q9P0L9 805 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 ITM2BQ9Y287 266 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 EPN1Q9Y6I3 576 aaPredicted RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 NCAPD2Q15021 1401 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 PNPLA7Q6ZV29 1317 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 CCT8L1PA6NM43 557 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 PLSCR1O15162 318 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 NDUFB5O43674 189 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 SORBS3O60504 671 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 DDNO94850 711 aaPredicted RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 UBTFL6P0CB48 400 aaPredicted RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 ZCCHC18P0CG32 403 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 STAT6P42226 847 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 USP46P62068 366 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 UBXN1Q04323 297 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 CCDC174Q6PII3 467 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 SULF1Q8IWU6 871 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 LCORLQ8N3X6 602 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 USP6NLQ92738 828 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 OSBP2Q969R2 916 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 NUDCD1Q96RS6 583 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 RANBP17Q9H2T7 1088 aaKnown RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 SAMSN1Q9NSI8 373 aaKnown RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 LARSQ9P2J5 1176 aaKnown RBP9.1□□□□□ -0.95
LDB3-201ENST00000263066 ATXN10Q9UBB4 475 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 TRIM10Q9UDY6 481 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 RCOR1Q9UKL0 485 aa9.1□□□□□ -0.95
LDB3-201ENST00000263066 FRMD4BQ9Y2L6 1034 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms