RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ERICH1Q86X53 443 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 DZIP1Q86YF9 867 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 FAXDC2Q96IV6 333 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 IFT74Q96LB3 600 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 ITSN1Q15811 1721 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 RNASELQ05823 741 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 BIRC3Q13489 604 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 IFI16Q16666 785 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 MYOCDQ8IZQ8 938 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 RPGRQ92834 1020 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 GFPT2O94808 682 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 CAVIN4Q5BKX8 364 aa17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 ELOA2Q8IYF1 753 aaPredicted RBP17.34■□□□□ 0.37
PRPF40B-201ENST00000261897 ABCC12Q96J65 1359 aa17.33■□□□□ 0.37
PRPF40B-201ENST00000261897 MYH13Q9UKX3 1938 aa17.33■□□□□ 0.37
PRPF40B-201ENST00000261897 RANBP1P43487 201 aa17.33■□□□□ 0.37
PRPF40B-201ENST00000261897 NEK9Q8TD19 979 aa17.33■□□□□ 0.37
PRPF40B-201ENST00000261897 EPS8L3Q8TE67 593 aaKnown RBP17.33■□□□□ 0.37
PRPF40B-201ENST00000261897 LRRD1A4D1F6 860 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 SERPING1P05155 500 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 ALDH5A1P51649 535 aaPredicted RBP17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 ADAM9Q13443 819 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 SLC29A2Q14542 456 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 SEPT7Q16181 437 aaKnown RBP17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 NAALADL2Q58DX5 795 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 LMNTD2Q8IXW0 634 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 METTL13Q8N6R0 699 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 hCG_2014768A0A024R1R8 64 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 RHOBTB3O94955 611 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 H2AFZP0C0S5 128 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 RAD23BP54727 409 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 NONOQ15233 471 aaKnown RBP eCLIP17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 SEPT14Q6ZU15 432 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 H2AFVQ71UI9 128 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 ADGRA1Q86SQ6 560 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 C15orf41Q9Y2V0 281 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 USH1CQ9Y6N9 552 aa17.33■□□□□ 0.36
PRPF40B-201ENST00000261897 CALCRLQ16602 461 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 HP1BP3Q5SSJ5 553 aaPredicted RBP17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 BZW1Q7L1Q6 419 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 TBCKQ8TEA7 893 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 TMEM260Q9NX78 707 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 MTRF1LQ9UGC7 380 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 ASIC3Q9UHC3 531 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 AMFRQ9UKV5 643 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 CCDC189A1A4V9 331 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 RASSF10A6NK89 507 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 LRRN2O75325 713 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 SUN1O94901 812 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 USP17L8P0C7I0 530 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 LONRF1Q17RB8 773 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 MIIPQ5JXC2 388 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 DDX12PQ92771 950 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 SH3GL3Q99963 347 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 LRRC4CQ9HCJ2 640 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 PNMA3Q9UL41 463 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 CCDC169A6NNP5 214 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 CLIC2O15247 247 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 PLCG2P16885 1265 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 CTCFP49711 727 aaPredicted RBP17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 DR1Q01658 176 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 IKQ13123 557 aaPredicted RBP17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 RNF10Q8N5U6 811 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 LARP4BQ92615 738 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 GDF3Q9NR23 364 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 PCDHA4Q9UN74 947 aa17.32■□□□□ 0.36
PRPF40B-201ENST00000261897 NPHP3-ACAD11A0A0J9YXS1 232 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 DRP2Q13474 957 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 CUL1Q13616 776 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 GJB7Q6PEY0 223 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 PIK3R5Q8WYR1 880 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 ANKS1AQ92625 1134 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 ISCUQ9H1K1 167 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 KLHL14Q9P2G3 628 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 CLTCQ00610 1675 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 GRID2IPA4D2P6 1211 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 RASGRF2O14827 1237 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 TROAPQ12815 778 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 SPIRE2Q8WWL2 714 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 CRNKL1Q9BZJ0 848 aaKnown RBP17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 CTTNBP2NLQ9P2B4 639 aa17.31■□□□□ 0.36
PRPF40B-201ENST00000261897 MYMKA6NI61 221 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 ATP2A2P16615 1042 aaKnown RBP17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 FAM26FQ5R3K3 315 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 PHLDB2Q86SQ0 1253 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 TAB3Q8N5C8 712 aaPredicted RBP17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 KIAA0895Q8NCT3 520 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 TATDN2Q93075 761 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 PLCB1Q9NQ66 1216 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 ATP6V0A2Q9Y487 856 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 COL4A3BPQ9Y5P4 624 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 DIP2CQ9Y2E4 1556 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 FRMPD2Q68DX3 1309 aaPredicted RBP17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 FLOT1O75955 427 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 ATF3P18847 181 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 SLC9A1P19634 815 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms