RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 LRRC41Q15345 812 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 MAN2A1Q16706 1144 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 MAP7D3Q8IWC1 876 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.19■□□□□ 0.02
CDH1-201ENST00000261769 TMEM39BQ9GZU3 492 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 FANCLQ9NW38 375 aa15.19■□□□□ 0.02
CDH1-201ENST00000261769 UTP11Q9Y3A2 253 aaKnown RBP15.19■□□□□ 0.02
CDH1-201ENST00000261769 MED7O43513 233 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 TXNP10599 105 aaKnown RBP15.18■□□□□ 0.02
CDH1-201ENST00000261769 CCNE1P24864 410 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 C8orf74Q6P047 294 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 GCNAQ96QF7 691 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 SLC12A6Q9UHW9 1150 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 PPP2R3BQ9Y5P8 575 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 BCL9O00512 1426 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 ARFGAP2Q8N6H7 521 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 UBE2Q2Q8WVN8 375 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 PPP1R16BQ96T49 567 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 PCIF1Q9H4Z3 704 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 TMEM63CQ9P1W3 806 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 KBTBD13C9JR72 458 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 COPB1P53618 953 aaKnown RBP15.18■□□□□ 0.02
CDH1-201ENST00000261769 PADI6Q6TGC4 694 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 SCYL3Q8IZE3 742 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 CCDC89Q8N998 374 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 FAM149B1Q96BN6 582 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 LRRC4Q9HBW1 653 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 OSTNP61366 133 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 TSGA10IPQ3SY00 556 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 BBS5Q8N3I7 341 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 GCOM2Q9BZD3 368 aaPredicted RBP15.18■□□□□ 0.02
CDH1-201ENST00000261769 NXF1Q9UBU9 619 aaKnown RBP15.18■□□□□ 0.02
CDH1-201ENST00000261769 PCDHA10Q9Y5I2 948 aa15.18■□□□□ 0.02
CDH1-201ENST00000261769 CLDN3O15551 220 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 IVLP07476 585 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 ANXA13P27216 316 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 RESTQ13127 1097 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 TOB2Q14106 344 aaPredicted RBP15.17■□□□□ 0.02
CDH1-201ENST00000261769 GABBR1Q9UBS5 961 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 TLDC2A0PJX2 215 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 CLIC2O15247 247 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 ALDH3A1P30838 453 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 RFX5P48382 616 aaPredicted RBP15.17■□□□□ 0.02
CDH1-201ENST00000261769 SARNPP82979 210 aaKnown RBP15.17■□□□□ 0.02
CDH1-201ENST00000261769 CDC42EP1Q00587 391 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 CEP55Q53EZ4 464 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 SWSAP1Q6NVH7 229 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 RAB3IL1Q8TBN0 382 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 ZBBXA8MT70 800 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 LRRC63Q05C16 580 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 PPP2R5EQ16537 467 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 CFAP221Q4G0U5 840 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 PRAMEF18Q5VWM3 479 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 TBC1D31Q96DN5 1066 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 ARPP19P56211 112 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 RNASE9P60153 205 aaKnown RBP15.17■□□□□ 0.02
CDH1-201ENST00000261769 ERO1BQ86YB8 467 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 CHST13Q8NET6 341 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 URGCPQ8TCY9 931 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 MTRQ99707 1265 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 KATNAL1Q9BW62 490 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 ZMYND15Q9H091 742 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 POLLQ9UGP5 575 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 PFASO15067 1338 aa15.17■□□□□ 0.02
CDH1-201ENST00000261769 GPIHBP1Q8IV16 184 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 CCDC105Q8IYK2 499 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 NUDT12Q9BQG2 462 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 ODF2LQ9ULJ1 636 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 POLR3GO15318 223 aaPredicted RBP15.16■□□□□ 0.02
CDH1-201ENST00000261769 CXCL9Q07325 125 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 THNSL1Q8IYQ7 743 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 OR6J1Q8NGC5 347 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 PIGOQ8TEQ8 1089 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 SLC9A2Q9UBY0 812 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 LARGE1O95461 756 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 ATP5DP30049 168 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 BAATQ14032 418 aaPredicted RBP15.16■□□□□ 0.02
CDH1-201ENST00000261769 TAOK1Q7L7X3 1001 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 TRIM58Q8NG06 486 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 ZFP91Q96JP5 570 aaPredicted RBP15.16■□□□□ 0.02
CDH1-201ENST00000261769 ZDHHC15Q96MV8 337 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 PKP1Q13835 747 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 GBA2Q9HCG7 927 aaPredicted RBP15.16■□□□□ 0.02
CDH1-201ENST00000261769 SEL1LQ9UBV2 794 aa15.16■□□□□ 0.02
CDH1-201ENST00000261769 A6NJR5 290 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 LGSNQ5TDP6 509 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 THEM5Q8N1Q8 247 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
CDH1-201ENST00000261769 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDH1-201ENST00000261769 MYO1FO00160 1098 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 POLRMTO00411 1230 aaKnown RBP15.15■□□□□ 0.02
CDH1-201ENST00000261769 THAP12O43422 761 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 RHOXF2BP0C7M4 288 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 DDIT3P35638 169 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 DAAM2Q86T65 1068 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 RHOXF2Q9BQY4 288 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 CYP2B6P20813 491 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 ITIH3Q06033 890 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 EPHA7Q15375 998 aa15.15■□□□□ 0.02
CDH1-201ENST00000261769 C6orf163Q5TEZ5 329 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms