RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 RWDD4Q6NW29 188 aaKnown RBP15.42■□□□□ 0.06
CUX2-201ENST00000261726 ZNF233A6NK53 670 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 DDIT3P35638 169 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 HIPK4Q8NE63 616 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 RNF139Q8WU17 664 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 MMTAG2Q9BU76 263 aaKnown RBP15.41■□□□□ 0.06
CUX2-201ENST00000261726 ZWILCHQ9H900 591 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 KDM5CP41229 1560 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 NACC1Q96RE7 527 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 GCNT4Q9P109 453 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 GDF11O95390 407 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 HSPA8P11142 646 aaKnown RBP15.41■□□□□ 0.06
CUX2-201ENST00000261726 BAG6P46379 1132 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 MTERF2Q49AM1 385 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 BABAM1Q9NWV8 329 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 SLC8A2Q9UPR5 921 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 CTNND1O60716 968 aaKnown RBP15.41■□□□□ 0.06
CUX2-201ENST00000261726 KLHL29Q96CT2 875 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 GINM1Q9NU53 330 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 POLIQ9UNA4 740 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 TAF11Q15544 211 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 PRPF38AQ8NAV1 312 aaKnown RBP15.41■□□□□ 0.06
CUX2-201ENST00000261726 SNX19Q92543 992 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 TRAIPQ9BWF2 469 aa15.41■□□□□ 0.06
CUX2-201ENST00000261726 CCND2P30279 289 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 RBM6P78332 1123 aaKnown RBP15.4■□□□□ 0.06
CUX2-201ENST00000261726 GCNAQ96QF7 691 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 AMNQ9BXJ7 453 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 STK17AQ9UEE5 414 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 ATP8B3O60423 1300 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 BLVRAP53004 296 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 DHX9Q08211 1270 aaKnown RBP15.4■□□□□ 0.06
CUX2-201ENST00000261726 SCRN1Q12765 414 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 THOC1Q96FV9 657 aaKnown RBP15.4■□□□□ 0.06
CUX2-201ENST00000261726 EXOC1LA0A1B0GW35 172 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 CHEK2O96017 543 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 MARK3P27448 753 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 CAPRIN1Q14444 709 aaKnown RBP15.4■□□□□ 0.06
CUX2-201ENST00000261726 FRA10AC1Q70Z53 315 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 GRAMD1CQ8IYS0 662 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 ZMAT2Q96NC0 199 aaKnown RBP15.4■□□□□ 0.06
CUX2-201ENST00000261726 GSPT1P15170 499 aaKnown RBP15.4■□□□□ 0.06
CUX2-201ENST00000261726 EPHB4P54760 987 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 BBS9Q3SYG4 887 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 KLC3Q6P597 504 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 NRBF2Q96F24 287 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 MYCBPQ99417 103 aaPredicted RBP15.4■□□□□ 0.06
CUX2-201ENST00000261726 TM6SF1Q9BZW5 370 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 PCDHA4Q9UN74 947 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 COL17A1Q9UMD9 1497 aaPredicted RBP15.4■□□□□ 0.06
CUX2-201ENST00000261726 PGRMC1O00264 195 aaKnown RBP15.4■□□□□ 0.06
CUX2-201ENST00000261726 CCNA1P78396 465 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 SCOCQ9UIL1 159 aa15.4■□□□□ 0.06
CUX2-201ENST00000261726 KCNA1Q09470 495 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 SLITRK6Q9H5Y7 841 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 SCINQ9Y6U3 715 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 SPHKAPQ2M3C7 1700 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 GIPC2Q8TF65 315 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 AP1M1Q9BXS5 423 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 NRBP1Q9UHY1 535 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 PI4K2BG5E9Z4 385 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 EIF4A1P60842 406 aaKnown RBP15.39■□□□□ 0.05
CUX2-201ENST00000261726 MYO1EQ12965 1108 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 SLC17A8Q8NDX2 589 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 CDC23Q9UJX2 597 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 MTMR6Q9Y217 621 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 FOSP01100 380 aaPredicted RBP15.39■□□□□ 0.05
CUX2-201ENST00000261726 GAP43P17677 238 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 HADHAP40939 763 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 TTLL7Q6ZT98 887 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 TTC25Q96NG3 672 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 JRKLQ9Y4A0 524 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 ABCA9Q8IUA7 1624 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 CHL1O00533 1208 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 SLC7A5Q01650 507 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 GRAMD1BQ3KR37 738 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 P2RX5Q93086 422 aa15.39■□□□□ 0.05
CUX2-201ENST00000261726 TET3O43151 1660 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 GTPBP10A4D1E9 387 aaKnown RBP15.38■□□□□ 0.05
CUX2-201ENST00000261726 SRGAP2CP0DJJ0 459 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 PDIA3P30101 505 aaKnown RBP15.38■□□□□ 0.05
CUX2-201ENST00000261726 MRPL47Q9HD33 250 aaKnown RBP15.38■□□□□ 0.05
CUX2-201ENST00000261726 TXLNGQ9NUQ3 528 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 SLC4A7Q9Y6M7 1214 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 CEP152O94986 1710 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 UNC13BO14795 1591 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 TMEM247A6NEH6 219 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 PYGLP06737 847 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 ESRRAP11474 423 aaPredicted RBP15.38■□□□□ 0.05
CUX2-201ENST00000261726 ELF1P32519 619 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 ANGPTL2Q9UKU9 493 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 PYCARDQ9ULZ3 195 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 PPEF1O14829 653 aaPredicted RBP15.38■□□□□ 0.05
CUX2-201ENST00000261726 NUDCD3Q8IVD9 361 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 ACRBPQ8NEB7 543 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 SERPINI1Q99574 410 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 NEUROG2Q9H2A3 272 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 PALD1Q9ULE6 856 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 GOLGA8IPA6NC78 632 aa15.38■□□□□ 0.05
CUX2-201ENST00000261726 GOLGA8JA6NMD2 632 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms