RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 MSH2P43246 934 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 ZNF131P52739 623 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 STK4Q13043 487 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 DTHD1Q6ZMT9 781 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 MAEAQ7L5Y9 396 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 RPUSD2Q8IZ73 545 aaKnown RBP7.9□□□□□ -1.15
CSDE1-201ENST00000261443 DRAXINQ8NBI3 349 aaPredicted RBP7.9□□□□□ -1.15
CSDE1-201ENST00000261443 ATXN2LQ8WWM7 1075 aaKnown RBP7.9□□□□□ -1.15
CSDE1-201ENST00000261443 IFT74Q96LB3 600 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 PRMT1Q99873 361 aaKnown RBP7.9□□□□□ -1.15
CSDE1-201ENST00000261443 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.9□□□□□ -1.15
CSDE1-201ENST00000261443 NACAP1Q9BZK3 213 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 ARHGEF10LQ9HCE6 1279 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 NLRC4Q9NPP4 1024 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 KBTBD4Q9NVX7 518 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 ZBTB12Q9Y330 459 aaPredicted RBP7.9□□□□□ -1.15
CSDE1-201ENST00000261443 CD2APQ9Y5K6 639 aa7.9□□□□□ -1.15
CSDE1-201ENST00000261443 TLDC2A0PJX2 215 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 MYBL1P10243 752 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 FCER1AP12319 257 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 IFNAR2P48551 515 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 CCNG1P51959 295 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 COPS2P61201 443 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 FUT2Q10981 343 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 IFIT5Q13325 482 aaKnown RBP7.89□□□□□ -1.15
CSDE1-201ENST00000261443 HLFQ16534 295 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 MAN2A1Q16706 1144 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 HGSNATQ68CP4 663 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 MAGEB6Q8N7X4 407 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 PBKQ96KB5 322 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 MTA3Q9BTC8 594 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 RAB17Q9H0T7 212 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 DPH5Q9H2P9 285 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 RNF41Q9H4P4 317 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-201ENST00000261443 ADAM22Q9P0K1 906 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 AMACRQ9UHK6 382 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 ABCA3Q99758 1704 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 PGRMC1O00264 195 aaKnown RBP7.89□□□□□ -1.15
CSDE1-201ENST00000261443 KRIT1O00522 736 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 CES2O00748 559 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 SERPING1P05155 500 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 PPP1R2P41236 205 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 ASIC1P78348 528 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 LAMB3Q13751 1172 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 SFMBT2Q5VUG0 894 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 ARMC3Q5W041 872 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 CATIPQ7Z7H3 387 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 TEKT4Q8WW24 435 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 TBC1D5Q92609 795 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 BORCS6Q96GS4 357 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 TANGO6Q9C0B7 1094 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 MTFR1LQ9H019 292 aa7.89□□□□□ -1.15
CSDE1-201ENST00000261443 TMX4Q9H1E5 349 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-201ENST00000261443 UTP11Q9Y3A2 253 aaKnown RBP7.89□□□□□ -1.15
CSDE1-201ENST00000261443 SMIM23A6NLE4 172 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 CYP27B1O15528 508 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 HIP1RO75146 1068 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 MMP13P45452 471 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 GCLCP48506 637 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 RBM5P52756 815 aaKnown RBP eCLIP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 SEC23AQ15436 765 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 PTPROQ16827 1216 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 TBC1D25Q3MII6 688 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 LMNTD2Q8IXW0 634 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 C4orf32Q8N8J7 132 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 GBP7Q8N8V2 638 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 ACTRT1Q8TDG2 376 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 RAPGEF4Q8WZA2 1011 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 ANKS1AQ92625 1134 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 ANKRD27Q96NW4 1050 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 GOPCQ9HD26 462 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 BAZ2BQ9UIF8 2168 aaKnown RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 KCPQ6ZWJ8 1503 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 NBPF26B4DH59 902 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 TTI1O43156 1089 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 SNX3O60493 162 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 SHBGP04278 402 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 PCK1P35558 622 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 PDE6CP51160 858 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 ENOX2Q16206 610 aaKnown RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 CCDC38Q502W7 563 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 LDHAL6AQ6ZMR3 332 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 KRT28Q7Z3Y7 464 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 GALNT15Q8N3T1 639 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 NBPF15Q8N660 670 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 ZNF512BQ96KM6 892 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 FMO2Q99518 471 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 PLCD4Q9BRC7 762 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 TRIM31Q9BZY9 425 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 SEMA6BQ9H3T3 888 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 ARHGEF3Q9NR81 526 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 FAM114A2Q9NRY5 505 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 THRAP3Q9Y2W1 955 aaKnown RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 USP15Q9Y4E8 981 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 MYH4Q9Y623 1939 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 SPDYE5A6NIY4 337 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 CCDC188H7C350 402 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 RGS16O15492 202 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms