RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PLCH1Q4KWH8 1693 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 FGFR1OPO95684 399 aaKnown RBP17.44■□□□□ 0.38
LMNB1-201ENST00000261366 SMTNP53814 917 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 SLC18A3Q16572 532 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 ECM1Q16610 540 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 MYOCDQ8IZQ8 938 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 GUF1Q8N442 669 aaKnown RBP17.44■□□□□ 0.38
LMNB1-201ENST00000261366 UHMK1Q8TAS1 419 aaKnown RBP17.44■□□□□ 0.38
LMNB1-201ENST00000261366 GOPCQ9HD26 462 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 CEP72Q9P209 647 aa17.44■□□□□ 0.38
LMNB1-201ENST00000261366 TLDC2A0PJX2 215 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 KRIT1O00522 736 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 ECHS1P30084 290 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 HSPA9P38646 679 aaKnown RBP17.43■□□□□ 0.38
LMNB1-201ENST00000261366 TNNI2P48788 182 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 EIF6P56537 245 aaKnown RBP17.43■□□□□ 0.38
LMNB1-201ENST00000261366 PRPF4BQ13523 1007 aaKnown RBP17.43■□□□□ 0.38
LMNB1-201ENST00000261366 ASIC2Q16515 512 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 CYB5D1Q6P9G0 228 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 DGKHQ86XP1 1220 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 REXO1Q8N1G1 1221 aaKnown RBP17.43■□□□□ 0.38
LMNB1-201ENST00000261366 RAPGEF5Q92565 580 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 SEC16BQ96JE7 1060 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 MAGEF1Q9HAY2 307 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 LUC7LQ9NQ29 371 aaKnown RBP17.43■□□□□ 0.38
LMNB1-201ENST00000261366 DOT1LQ8TEK3 1739 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 TTI1O43156 1089 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 GNAQP50148 359 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 PTK2Q05397 1052 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 IFFO1Q0D2I5 559 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 UBE4AQ14139 1066 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 ANKS1AQ92625 1134 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 NGLY1Q96IV0 654 aa17.43■□□□□ 0.38
LMNB1-201ENST00000261366 SEC63Q9UGP8 760 aaKnown RBP17.43■□□□□ 0.38
LMNB1-201ENST00000261366 RASSF9O75901 435 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 HIBADHP31937 336 aaKnown RBP17.42■□□□□ 0.38
LMNB1-201ENST00000261366 PARP10Q53GL7 1025 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 FAM182BQ5T319 152 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 MREGQ8N565 214 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 ZMYND12Q9H0C1 365 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 ATP8A1Q9Y2Q0 1164 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 TULP1O00294 542 aaPredicted RBP17.42■□□□□ 0.38
LMNB1-201ENST00000261366 LRRC63Q05C16 580 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 DHX9Q08211 1270 aaKnown RBP17.42■□□□□ 0.38
LMNB1-201ENST00000261366 COASYQ13057 564 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 SNCBQ16143 134 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 PARP9Q8IXQ6 854 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 ARFGAP2Q8N6H7 521 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 SPAG5Q96R06 1193 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 TRIM51Q9BSJ1 452 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 ISCUQ9H1K1 167 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 RNF14Q9UBS8 474 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 CACNA1SQ13698 1873 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 PPP1R12BO60237 982 aaPredicted RBP17.42■□□□□ 0.38
LMNB1-201ENST00000261366 PPP1R2P41236 205 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 FKBP3Q00688 224 aaKnown RBP17.42■□□□□ 0.38
LMNB1-201ENST00000261366 NEDD9Q14511 834 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 C12orf60Q5U649 245 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 KRT79Q5XKE5 535 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 CD302Q8IX05 232 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 CACNA2D3Q8IZS8 1091 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 FUKQ8N0W3 1084 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 PLCB1Q9NQ66 1216 aa17.42■□□□□ 0.38
LMNB1-201ENST00000261366 NOC2LQ9Y3T9 749 aaKnown RBP17.42■□□□□ 0.38
LMNB1-201ENST00000261366 KIF4AO95239 1232 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 SLC9A1P19634 815 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 DDR1Q08345 913 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 UBE2SQ16763 222 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 C6orf89Q6UWU4 347 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 BARGINQ6ZT62 677 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 LINC00116Q8NCU8 138 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 RAD54LQ92698 747 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 IQCDQ96DY2 449 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 PANK4Q9NVE7 773 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 SLC12A6Q9UHW9 1150 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 GGT7Q9UJ14 662 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 TPX2Q9ULW0 747 aaKnown RBP17.41■□□□□ 0.38
LMNB1-201ENST00000261366 PCDHGC5Q9Y5F6 944 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 TRAPPC3O43617 180 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 PPP2R2AP63151 447 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 TMEM266Q2M3C6 531 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 ANKRD20A8PQ5CZ79 823 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 PPP4R3AQ6IN85 833 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 YTHDF3Q7Z739 585 aaKnown RBP17.41■□□□□ 0.38
LMNB1-201ENST00000261366 FAM228AQ86W67 206 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 METTL13Q8N6R0 699 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 SELENOSQ9BQE4 189 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 BAIAP2L1Q9UHR4 511 aa17.41■□□□□ 0.38
LMNB1-201ENST00000261366 E9PMD0 336 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 H0YGN5 161 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 GNA11P29992 359 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 ELF1P32519 619 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 GRIK5Q16478 980 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 HERC4Q5GLZ8 1057 aaPredicted RBP17.4■□□□□ 0.38
LMNB1-201ENST00000261366 FAM26FQ5R3K3 315 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 TCERG1LQ5VWI1 586 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 ZNF571Q7Z3V5 609 aaPredicted RBP17.4■□□□□ 0.38
LMNB1-201ENST00000261366 DAGLBQ8NCG7 672 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 GPR101Q96P66 508 aaPredicted RBP17.4■□□□□ 0.38
LMNB1-201ENST00000261366 PNMA2Q9UL42 364 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms