RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TRIML1Q8N9V2 468 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 JAKMIP2Q96AA8 810 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 SAAL1Q96ER3 474 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 FAM163AQ96GL9 167 aaPredicted RBP10.05□□□□□ -0.8
CKAP2-201ENST00000258607 TRIM31Q9BZY9 425 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 RPAP3Q9H6T3 665 aaPredicted RBP10.05□□□□□ -0.8
CKAP2-201ENST00000258607 GOPCQ9HD26 462 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 SLX4Q8IY92 1834 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 ARHGEF35A5YM69 484 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 H7C1D1 291 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 BICD1Q96G01 975 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 OTUD5Q96G74 571 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 WDR18Q9BV38 432 aa10.05□□□□□ -0.8
CKAP2-201ENST00000258607 NHEJ1Q9H9Q4 299 aaPredicted RBP10.05□□□□□ -0.8
CKAP2-201ENST00000258607 ESYT3A0FGR9 886 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 CTAGE9A4FU28 777 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 NDUFA10O95299 355 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 BAATQ14032 418 aaPredicted RBP10.04□□□□□ -0.8
CKAP2-201ENST00000258607 EPC2Q52LR7 807 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 GIMAP8Q8ND71 665 aaPredicted RBP10.04□□□□□ -0.8
CKAP2-201ENST00000258607 MS4A14Q96JA4 679 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 RMDN3Q96TC7 470 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 BPIFA3Q9BQP9 254 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 PACSIN1Q9BY11 444 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 IFIH1Q9BYX4 1025 aaKnown RBP10.04□□□□□ -0.8
CKAP2-201ENST00000258607 SH3GLB2Q9NR46 395 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 PICK1Q9NRD5 415 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 COL20A1Q9P218 1284 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 MYH8P13535 1937 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 M0R2N6 131 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 IPO5O00410 1097 aaKnown RBP10.04□□□□□ -0.8
CKAP2-201ENST00000258607 ATP1A1P05023 1023 aaKnown RBP10.04□□□□□ -0.8
CKAP2-201ENST00000258607 RCAN1P53805 252 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 RPS6P62753 249 aaKnown RBP10.04□□□□□ -0.8
CKAP2-201ENST00000258607 C2orf54Q08AI8 447 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 ARHGEF16Q5VV41 709 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 SNRNP48Q6IEG0 339 aaKnown RBP10.04□□□□□ -0.8
CKAP2-201ENST00000258607 MIER3Q7Z3K6 550 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 TICAM2Q86XR7 235 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 TMEM139Q8IV31 216 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 FAM178BQ8IXR5 827 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 NOA1Q8NC60 698 aaKnown RBP10.04□□□□□ -0.8
CKAP2-201ENST00000258607 ZNF397Q8NF99 534 aaPredicted RBP10.04□□□□□ -0.8
CKAP2-201ENST00000258607 SERPINA10Q9UK55 444 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 NRAPQ86VF7 1730 aa10.04□□□□□ -0.8
CKAP2-201ENST00000258607 A0A0U1RQG5 324 aaPredicted RBP10.03□□□□□ -0.8
CKAP2-201ENST00000258607 ADM5C9JUS6 153 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 K7ENM7 598 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 STX10O60499 249 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 EXOC3O60645 756 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 ATP9AO75110 1047 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 CLCN6P51797 869 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 PEX3P56589 373 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 IGBP1P78318 339 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 XKR9Q5GH70 373 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 CCDC181Q5TID7 509 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 TRIM65Q6PJ69 517 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 TMCO3Q6UWJ1 677 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 CYP26C1Q6V0L0 522 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 APTXQ7Z2E3 356 aaKnown RBP10.03□□□□□ -0.8
CKAP2-201ENST00000258607 NCAPG2Q86XI2 1143 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 POP1Q99575 1024 aaKnown RBP10.03□□□□□ -0.8
CKAP2-201ENST00000258607 LXNQ9BS40 222 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 CCSER1Q9C0I3 900 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 WRAP73Q9P2S5 460 aaPredicted RBP10.03□□□□□ -0.8
CKAP2-201ENST00000258607 SLC16A4O15374 487 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 GFPT2O94808 682 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 CYP11B2P19099 503 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 CDKAL1Q5VV42 579 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 ERMNQ8TAM6 284 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 MTA3Q9BTC8 594 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 MYH10P35580 1976 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 BICDL2A1A5D9 508 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 LGALS16A8MUM7 142 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 SSR1P43307 286 aaKnown RBP10.03□□□□□ -0.8
CKAP2-201ENST00000258607 SPAG1Q07617 926 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 KIF5AQ12840 1032 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 TTC19Q6DKK2 380 aaPredicted RBP10.03□□□□□ -0.8
CKAP2-201ENST00000258607 NFRKBQ6P4R8 1299 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 SPIRE2Q8WWL2 714 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 MTMR9Q96QG7 549 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 R3HDMLQ9H3Y0 253 aa10.03□□□□□ -0.8
CKAP2-201ENST00000258607 OPLAHO14841 1288 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 RHOBTB3O94955 611 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 CAP2P40123 477 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 MAGEA1P43355 309 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 KLHL7Q8IXQ5 586 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 IFT81Q8WYA0 676 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 SCN9AQ15858 1988 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 CETN3O15182 167 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 PGK2P07205 417 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 COPB2P35606 906 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 GCLMP48507 274 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 CNTN2Q02246 1040 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 EHHADHQ08426 723 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 MTERF2Q49AM1 385 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 GJC2Q5T442 439 aaPredicted RBP10.02□□□□□ -0.81
CKAP2-201ENST00000258607 UNC13DQ70J99 1090 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 RTKN2Q8IZC4 609 aa10.02□□□□□ -0.81
CKAP2-201ENST00000258607 CHURC1Q8WUH1 139 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms