RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 NARFQ9UHQ1 456 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 PLAAQ9Y263 795 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 ATP8A1Q9Y2Q0 1164 aa5.2□□□□□ -1.58
USP44-201ENST00000258499 KDM3AQ9Y4C1 1321 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 A0A087X0T9 212 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 CALUO43852 315 aaPredicted RBP5.19□□□□□ -1.58
USP44-201ENST00000258499 EXOC3O60645 756 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 GDF11O95390 407 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 VIMP08670 466 aaKnown RBP5.19□□□□□ -1.58
USP44-201ENST00000258499 FAM228BP0C875 321 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 GJC1P36383 396 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 SEC24CP53992 1094 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 FBXW10Q5XX13 1052 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 SLFN13Q68D06 897 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 KCNK18Q7Z418 384 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 SFR1Q86XK3 245 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 KSR1Q8IVT5 923 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 ADGRF4Q8IZF3 695 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 GIMAP7Q8NHV1 300 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 PIGOQ8TEQ8 1089 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 RBM17Q96I25 401 aaKnown RBP5.19□□□□□ -1.58
USP44-201ENST00000258499 GCNT4Q9P109 453 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 CEP72Q9P209 647 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 FRMD4BQ9Y2L6 1034 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 ATP6V0A2Q9Y487 856 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 FLT1P17948 1338 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 TNS2Q63HR2 1409 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.19□□□□□ -1.58
USP44-201ENST00000258499 PNMA6FA0A0J9YX94 578 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 NKRFO15226 690 aaKnown RBP eCLIP5.19□□□□□ -1.58
USP44-201ENST00000258499 SYF2O95926 243 aaKnown RBP5.19□□□□□ -1.58
USP44-201ENST00000258499 AFPP02771 609 aaKnown RBP5.19□□□□□ -1.58
USP44-201ENST00000258499 SLURP2P0DP57 97 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 PDHBP11177 359 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 SLC9A1P19634 815 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 MAP2K1Q02750 393 aaPredicted RBP5.19□□□□□ -1.58
USP44-201ENST00000258499 MEA1Q16626 185 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 ALS2CLQ60I27 953 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 CENPPQ6IPU0 288 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 RUFY4Q6ZNE9 571 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 CREG2Q8IUH2 290 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 C4orf32Q8N8J7 132 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 TBC1D22AQ8WUA7 517 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 MXD3Q9BW11 206 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 AMFRQ9UKV5 643 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 NOVA2Q9UNW9 492 aaKnown RBP5.19□□□□□ -1.58
USP44-201ENST00000258499 ABCC6O95255 1503 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 PGRMC1O00264 195 aaKnown RBP5.19□□□□□ -1.58
USP44-201ENST00000258499 ZNF263O14978 683 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 SPOPO43791 374 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 RPS6KA4O75676 772 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 GLI1P08151 1106 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 ATP2B4P23634 1241 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 GPSM2P81274 684 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 DHX9Q08211 1270 aaKnown RBP5.19□□□□□ -1.58
USP44-201ENST00000258499 CCDC174Q6PII3 467 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 MGARPQ8TDB4 240 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 AMACRQ9UHK6 382 aa5.19□□□□□ -1.58
USP44-201ENST00000258499 C5P01031 1676 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 LMTK3Q96Q04 1460 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 BUB1BO60566 1050 aaPredicted RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 SLCO1A2P46721 670 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 IFNAR2P48551 515 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 VPS41P49754 854 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 PLTPP55058 493 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 PSMD2Q13200 908 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 ZNF211Q13398 564 aaPredicted RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 MIIPQ5JXC2 388 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 STXBP4Q6ZWJ1 553 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 PTF1AQ7RTS3 328 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 TSEN2Q8NCE0 465 aaKnown RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 PAIP2Q9BPZ3 127 aaKnown RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 ANO3Q9BYT9 981 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 BLOC1S4Q9NUP1 217 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 MTMR4Q9NYA4 1195 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 TMOD2Q9NZR1 351 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 THRAP3Q9Y2W1 955 aaKnown RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 CHD2O14647 1828 aaKnown RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 EIF3HO15372 352 aaKnown RBP eCLIP5.18□□□□□ -1.58
USP44-201ENST00000258499 RAD51CO43502 376 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 FGGP02679 453 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 FAM153BP0C7A2 387 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 CCDC172P0C7W6 258 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 SP4Q02446 784 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 ICA1Q05084 483 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 MKRN4PQ13434 485 aaPredicted RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 CTTNQ14247 550 aaKnown RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 SLC18A3Q16572 532 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 FAM153CQ494X1 144 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 CERKLQ49MI3 558 aaPredicted RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 GPATCH4Q5T3I0 446 aaKnown RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 FAM178BQ8IXR5 827 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 MMGT1Q8N4V1 131 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 RNF10Q8N5U6 811 aaKnown RBP5.18□□□□□ -1.58
USP44-201ENST00000258499 TEKT1Q969V4 418 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 TLR10Q9BXR5 811 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 TAOK3Q9H2K8 898 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 DBNDD1Q9H9R9 158 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 KCNK9Q9NPC2 374 aa5.18□□□□□ -1.58
USP44-201ENST00000258499 FAM153AQ9UHL3 310 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms