RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 FAM110CQ1W6H9 321 aa10.58□□□□□ -0.72
NIP7-202ENST00000254941 GNPTABQ3T906 1256 aa10.58□□□□□ -0.72
NIP7-202ENST00000254941 POTEGQ6S5H5 508 aa10.58□□□□□ -0.72
NIP7-202ENST00000254941 DHX40Q8IX18 779 aaKnown RBP10.58□□□□□ -0.72
NIP7-202ENST00000254941 HHIPL1Q96JK4 782 aa10.58□□□□□ -0.72
NIP7-202ENST00000254941 MMP19Q99542 508 aa10.58□□□□□ -0.72
NIP7-202ENST00000254941 LRRC27Q9C0I9 530 aa10.58□□□□□ -0.72
NIP7-202ENST00000254941 RGL1Q9NZL6 768 aa10.58□□□□□ -0.72
NIP7-202ENST00000254941 LOC102724159A0A0B4J2E5 919 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 FAM155AB1AL88 458 aaPredicted RBP10.57□□□□□ -0.72
NIP7-202ENST00000254941 B4DLN1 442 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 SPATA31C2B4DYI2 1134 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 IGF2BP3O00425 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
NIP7-202ENST00000254941 KLRC4O43908 158 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 TOMM70O94826 608 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 RHOBTB3O94955 611 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 CYP4A11Q02928 519 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 FSTL1Q12841 308 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 DHX8Q14562 1220 aaKnown RBP10.57□□□□□ -0.72
NIP7-202ENST00000254941 PWP2Q15269 919 aaKnown RBP10.57□□□□□ -0.72
NIP7-202ENST00000254941 CT47A1Q5JQC4 288 aaPredicted RBP10.57□□□□□ -0.72
NIP7-202ENST00000254941 NEK9Q8TD19 979 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 ANP32BQ92688 251 aaKnown RBP10.57□□□□□ -0.72
NIP7-202ENST00000254941 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 FGD4Q96M96 766 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 EFCC1Q9HA90 598 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 PKD2L1Q9P0L9 805 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 DACH1Q9UI36 760 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 DNM3Q9UQ16 869 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 NFASCO94856 1347 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 MYMKA6NI61 221 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 TMEM88BA6NKF7 163 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 BECN2A8MW95 431 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 E9PMD0 336 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 DDX39AO00148 427 aaKnown RBP10.57□□□□□ -0.72
NIP7-202ENST00000254941 IKBKBO14920 756 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 STRNO43815 780 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 PGK2P07205 417 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 PLA2G4BP0C869 781 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 KCNA2P16389 499 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 ICAM3P32942 547 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 SLC12A3P55017 1021 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 PSMC6P62333 389 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 KRT76Q01546 638 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 ZNF658Q5TYW1 1059 aaPredicted RBP10.57□□□□□ -0.72
NIP7-202ENST00000254941 WDR78Q5VTH9 848 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 ABRAQ8N0Z2 381 aa10.57□□□□□ -0.72
NIP7-202ENST00000254941 SYT2Q8N9I0 419 aaPredicted RBP10.57□□□□□ -0.72
NIP7-202ENST00000254941 MPHOSPH6Q99547 160 aaKnown RBP10.57□□□□□ -0.72
NIP7-202ENST00000254941 ADGRA2Q96PE1 1338 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 ZNF236Q9UL36 1845 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 PVALEFA0A1B0GWK0 134 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 GOLGA6L19H0YKK7 550 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 SFNP31947 248 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 ASIC1P78348 528 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 PDE4DQ08499 809 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 KMT5BQ4FZB7 885 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 ZNF746Q6NUN9 644 aaPredicted RBP10.56□□□□□ -0.72
NIP7-202ENST00000254941 MIER3Q7Z3K6 550 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 TPH2Q8IWU9 490 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 AOPEPQ8N6M6 819 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 DDX12PQ92771 950 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 DYDC2Q96IM9 177 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 SENP7Q9BQF6 1050 aa10.56□□□□□ -0.72
NIP7-202ENST00000254941 ABT1Q9ULW3 272 aaKnown RBP10.56□□□□□ -0.72
NIP7-202ENST00000254941 WDR64B1ANS9 1081 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 EYA4O95677 639 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 CCNE2O96020 404 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 P4HBP07237 508 aaKnown RBP10.55□□□□□ -0.72
NIP7-202ENST00000254941 TGFB3P10600 412 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 ERCC5P28715 1186 aaPredicted RBP10.55□□□□□ -0.72
NIP7-202ENST00000254941 JAK3P52333 1124 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 CTTNQ14247 550 aaKnown RBP10.55□□□□□ -0.72
NIP7-202ENST00000254941 NCAPHQ15003 741 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 UNC13DQ70J99 1090 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 GIMAP8Q8ND71 665 aaPredicted RBP10.55□□□□□ -0.72
NIP7-202ENST00000254941 RDM1Q8NG50 284 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 MORC4Q8TE76 937 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 CCDC47Q96A33 483 aaKnown RBP10.55□□□□□ -0.72
NIP7-202ENST00000254941 DNAJC19Q96DA6 116 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 NACC1Q96RE7 527 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 LXNQ9BS40 222 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 GTPBP4Q9BZE4 634 aaKnown RBP10.55□□□□□ -0.72
NIP7-202ENST00000254941 WRAP73Q9P2S5 460 aaPredicted RBP10.55□□□□□ -0.72
NIP7-202ENST00000254941 TCEAL9Q9UHQ7 104 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 IVNS1ABPQ9Y6Y0 642 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 MGAMO43451 1857 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 SMTNL1A8MU46 457 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 PPP1R3GB7ZBB8 358 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 CD44P16070 742 aaKnown RBP10.55□□□□□ -0.72
NIP7-202ENST00000254941 CYP11B2P19099 503 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 ADORA2AP29274 412 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 MAPK4P31152 587 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 MYL5Q02045 173 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 SP2Q02086 613 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 SREBF2Q12772 1141 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 TAF1CQ15572 869 aaPredicted RBP10.55□□□□□ -0.72
NIP7-202ENST00000254941 ZNF792Q3KQV3 632 aa10.55□□□□□ -0.72
NIP7-202ENST00000254941 ARSHQ5FYA8 562 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms