RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 QRICH1Q2TAL8 776 aa18.77■□□□□ 0.6
FOXA1-201ENST00000250448 CCDC70Q6NSX1 233 aa18.77■□□□□ 0.6
FOXA1-201ENST00000250448 PNMA6FA0A0J9YX94 578 aa18.77■□□□□ 0.6
FOXA1-201ENST00000250448 CLGNO14967 610 aa18.77■□□□□ 0.6
FOXA1-201ENST00000250448 AENQ8WTP8 325 aaKnown RBP18.77■□□□□ 0.6
FOXA1-201ENST00000250448 DCAF4Q8WV16 495 aa18.77■□□□□ 0.6
FOXA1-201ENST00000250448 C6orf50Q9HD87 102 aa18.77■□□□□ 0.6
FOXA1-201ENST00000250448 GPRC5DQ9NZD1 345 aa18.77■□□□□ 0.6
FOXA1-201ENST00000250448 A0A1W2PQJ5 194 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 SHOX2O60902 331 aaPredicted RBP18.76■□□□□ 0.59
FOXA1-201ENST00000250448 MMP14P50281 582 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 HIRAP54198 1017 aaPredicted RBP18.76■□□□□ 0.59
FOXA1-201ENST00000250448 FAM76AQ8TAV0 307 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 CCDC47Q96A33 483 aaKnown RBP18.76■□□□□ 0.59
FOXA1-201ENST00000250448 MAGEF1Q9HAY2 307 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 FAM184BQ9ULE4 1060 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 GOLGA6BA6NDN3 693 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 ZBTB5O15062 677 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 NOP2P46087 812 aaKnown RBP18.76■□□□□ 0.59
FOXA1-201ENST00000250448 FIGNQ5HY92 759 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 MMGT1Q8N4V1 131 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 EEF2KMTQ96G04 330 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 ERGIC2Q96RQ1 377 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 CUEDC2Q9H467 287 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 LRWD1Q9UFC0 647 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 SNX12Q9UMY4 172 aa18.76■□□□□ 0.59
FOXA1-201ENST00000250448 ZNF263O14978 683 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 BMP3P12645 472 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 PSEN1P49768 467 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 TNFAIP1Q13829 316 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 SPA17Q15506 151 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 CDC37Q16543 378 aaPredicted RBP18.75■□□□□ 0.59
FOXA1-201ENST00000250448 USH1GQ495M9 461 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 TTC31Q49AM3 519 aaPredicted RBP18.75■□□□□ 0.59
FOXA1-201ENST00000250448 MIIPQ5JXC2 388 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 FAM83BQ5T0W9 1011 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 ANKRD40Q6AI12 368 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 NOC4LQ9BVI4 516 aaKnown RBP18.75■□□□□ 0.59
FOXA1-201ENST00000250448 ARHGEF10LQ9HCE6 1279 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 GGA3Q9NZ52 723 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 SBF1O95248 1867 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 PHF20L1A8MW92 1017 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 PLCG1P19174 1290 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 INPP5BP32019 993 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 PDE4DQ08499 809 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 DAGLBQ8NCG7 672 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 GMCL1P1Q8NEA9 526 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 TRIM58Q8NG06 486 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 GOLGA6CA6NDK9 693 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 LAD1O00515 517 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 TBC1D12O60347 775 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 TACC1O75410 805 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 GOLGA6DP0CG33 693 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 LETM2Q2VYF4 491 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 ZNF572Q7Z3I7 529 aaPredicted RBP18.75■□□□□ 0.59
FOXA1-201ENST00000250448 CREG2Q8IUH2 290 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 REXO1Q8N1G1 1221 aaKnown RBP18.75■□□□□ 0.59
FOXA1-201ENST00000250448 RUBCNQ92622 972 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 CCDC42Q96M95 316 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 GOLGA6AQ9NYA3 693 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 JRKLQ9Y4A0 524 aa18.75■□□□□ 0.59
FOXA1-201ENST00000250448 SMCHD1A6NHR9 2005 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 PRPHP41219 470 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 PRKG1Q13976 671 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 DNAJC21Q5F1R6 531 aaKnown RBP18.74■□□□□ 0.59
FOXA1-201ENST00000250448 FKBP15Q5T1M5 1219 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 CABP7Q86V35 215 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 GPC2Q8N158 579 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 SMCR8Q8TEV9 937 aaPredicted RBP18.74■□□□□ 0.59
FOXA1-201ENST00000250448 CAPN6Q9Y6Q1 641 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 ANKRD65E5RJM6 399 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 USO1O60763 962 aaKnown RBP18.74■□□□□ 0.59
FOXA1-201ENST00000250448 GNA11P29992 359 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 ADCY7P51828 1080 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 ASIC1P78348 528 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 KRT26Q7Z3Y9 468 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 PPM1EQ8WY54 764 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 TRIM9Q9C026 710 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 SH2D4AQ9H788 454 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 TMX2Q9Y320 296 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 PCDHA1Q9Y5I3 950 aa18.74■□□□□ 0.59
FOXA1-201ENST00000250448 PLEKP08567 350 aaPredicted RBP18.73■□□□□ 0.59
FOXA1-201ENST00000250448 ITIH3Q06033 890 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 STK4Q13043 487 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 SND1Q7KZF4 910 aaKnown RBP eCLIP18.73■□□□□ 0.59
FOXA1-201ENST00000250448 PACS2Q86VP3 889 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 TBCKQ8TEA7 893 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 IQCDQ96DY2 449 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 GMCL1Q96IK5 515 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 ZNF341Q9BYN7 854 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 USP17L15C9J2P7 530 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 USP17L11C9JVI0 530 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 USP17L18D6R9N7 530 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 USP17L20D6RJB6 530 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 PPP1R2P41236 205 aa18.73■□□□□ 0.59
FOXA1-201ENST00000250448 USP17L24Q0WX57 530 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms