RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 E2F4Q16254 413 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 RRAGBQ5VZM2 374 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 CAVIN1Q6NZI2 390 aaKnown RBP14.53□□□□□ -0.08
LSM8-201ENST00000249299 KRBA2Q6ZNG9 492 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 USP49Q70CQ1 688 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 ARMCX2Q7L311 632 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 CEP57L1Q8IYX8 460 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 SCFD2Q8WU76 684 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 APBA2Q99767 749 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 HSD17B14Q9BPX1 270 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 TINF2Q9BSI4 451 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 MMTAG2Q9BU76 263 aaKnown RBP14.53□□□□□ -0.08
LSM8-201ENST00000249299 LRRC27Q9C0I9 530 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 ABHD16BQ9H3Z7 469 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 TMEM63CQ9P1W3 806 aa14.53□□□□□ -0.08
LSM8-201ENST00000249299 POTEMA6NI47 508 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 WDR64B1ANS9 1081 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 DKC1O60832 514 aaKnown RBP eCLIP14.52□□□□□ -0.08
LSM8-201ENST00000249299 PSMC4P43686 418 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 C1QTNF8P60827 252 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 ITGB3BPQ13352 177 aaPredicted RBP14.52□□□□□ -0.08
LSM8-201ENST00000249299 TTLL4Q14679 1199 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 TMEM119Q4V9L6 283 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 SPECC1Q5M775 1068 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 CNNM3Q8NE01 707 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 SNX29Q8TEQ0 813 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 CDK5RAP3Q96JB5 506 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 TNMDQ9H2S6 317 aa14.52□□□□□ -0.08
LSM8-201ENST00000249299 NKRFO15226 690 aaKnown RBP eCLIP14.51□□□□□ -0.09
LSM8-201ENST00000249299 ACTN4O43707 911 aaKnown RBP14.51□□□□□ -0.09
LSM8-201ENST00000249299 LYPLA2O95372 231 aa14.51□□□□□ -0.09
LSM8-201ENST00000249299 XRCC6P12956 609 aaKnown RBP eCLIP14.51□□□□□ -0.09
LSM8-201ENST00000249299 STAT6P42226 847 aa14.51□□□□□ -0.09
LSM8-201ENST00000249299 PRMT2P55345 433 aa14.51□□□□□ -0.09
LSM8-201ENST00000249299 AMPD3Q01432 767 aa14.51□□□□□ -0.09
LSM8-201ENST00000249299 LONRF3Q496Y0 759 aa14.51□□□□□ -0.09
LSM8-201ENST00000249299 CCDC62Q6P9F0 684 aa14.51□□□□□ -0.09
LSM8-201ENST00000249299 METTL7BQ6UX53 244 aa14.51□□□□□ -0.09
LSM8-201ENST00000249299 SH3RF1Q7Z6J0 888 aa14.51□□□□□ -0.09
LSM8-201ENST00000249299 RASSF8Q8NHQ8 419 aa14.51□□□□□ -0.09
LSM8-201ENST00000249299 UNC45AQ9H3U1 944 aa14.51□□□□□ -0.09
LSM8-201ENST00000249299 JPH1Q9HDC5 661 aaPredicted RBP14.51□□□□□ -0.09
LSM8-201ENST00000249299 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.51□□□□□ -0.09
LSM8-201ENST00000249299 GPR25O00155 361 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 ATP9AO75110 1047 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 TRPA1O75762 1119 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 ATG7O95352 703 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 P4HBP07237 508 aaKnown RBP14.5□□□□□ -0.09
LSM8-201ENST00000249299 CCT6AP40227 531 aaKnown RBP14.5□□□□□ -0.09
LSM8-201ENST00000249299 ZNF445P59923 1031 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 NAALADL2Q58DX5 795 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 IQSEC1Q6DN90 963 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 NCAPH2Q6IBW4 605 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 CNNM4Q6P4Q7 775 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 MIER3Q7Z3K6 550 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 EMID1Q96A84 441 aaPredicted RBP14.5□□□□□ -0.09
LSM8-201ENST00000249299 ERO1AQ96HE7 468 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 EIF2AK1Q9BQI3 630 aaKnown RBP14.5□□□□□ -0.09
LSM8-201ENST00000249299 GTPBP4Q9BZE4 634 aaKnown RBP14.5□□□□□ -0.09
LSM8-201ENST00000249299 KATNBL1Q9H079 304 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 KBTBD4Q9NVX7 518 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 SLC9A2Q9UBY0 812 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 DDX41Q9UJV9 622 aaKnown RBP14.5□□□□□ -0.09
LSM8-201ENST00000249299 PCDHA10Q9Y5I2 948 aa14.5□□□□□ -0.09
LSM8-201ENST00000249299 A0A087X0B3 334 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 PP2D1A8MPX8 630 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 TBC1D8O95759 1140 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 SNAI1O95863 264 aaPredicted RBP14.49□□□□□ -0.09
LSM8-201ENST00000249299 SPATA31C1P0DKV0 1188 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 PLCG1P19174 1290 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 CDC25AP30304 524 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 MDM2Q00987 491 aaPredicted RBP14.49□□□□□ -0.09
LSM8-201ENST00000249299 GRB10Q13322 594 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 KARSQ15046 597 aaKnown RBP14.49□□□□□ -0.09
LSM8-201ENST00000249299 ZSCAN23Q3MJ62 389 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 NT5DC1Q5TFE4 455 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 TAPT1Q6NXT6 567 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 PDXDC2PQ6P474 469 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 SEPT14Q6ZU15 432 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 CATSPER3Q86XQ3 398 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 PDILTQ8N807 584 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 NPLOC4Q8TAT6 608 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 DHX58Q96C10 678 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 TRIM47Q96LD4 638 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 NACC1Q96RE7 527 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 BEGAINQ9BUH8 593 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 ZSWIM4Q9H7M6 989 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 LCTP09848 1927 aa14.49□□□□□ -0.09
LSM8-201ENST00000249299 EML1O00423 815 aa14.48□□□□□ -0.09
LSM8-201ENST00000249299 SLITRK3O94933 977 aa14.48□□□□□ -0.09
LSM8-201ENST00000249299 SMC2O95347 1197 aa14.48□□□□□ -0.09
LSM8-201ENST00000249299 CAVIN2O95810 425 aa14.48□□□□□ -0.09
LSM8-201ENST00000249299 PSAPP07602 524 aa14.48□□□□□ -0.09
LSM8-201ENST00000249299 UBA1P22314 1058 aaKnown RBP14.48□□□□□ -0.09
LSM8-201ENST00000249299 QARSP47897 775 aaKnown RBP14.48□□□□□ -0.09
LSM8-201ENST00000249299 ACVR2BQ13705 512 aa14.48□□□□□ -0.09
LSM8-201ENST00000249299 LAMC2Q13753 1193 aa14.48□□□□□ -0.09
LSM8-201ENST00000249299 CELF3Q5SZQ8 465 aaKnown RBP14.48□□□□□ -0.09
LSM8-201ENST00000249299 MIS18BP1Q6P0N0 1132 aa14.48□□□□□ -0.09
LSM8-201ENST00000249299 C4orf19Q8IY42 314 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms