RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 CUL3Q13618 768 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 RNF10Q8N5U6 811 aaKnown RBP19.94■□□□□ 0.78
PTPN12-201ENST00000248594 FAM133AQ8N9E0 248 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 SPIRE2Q8WWL2 714 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 ARPP21Q9UBL0 812 aaPredicted RBP19.94■□□□□ 0.78
PTPN12-201ENST00000248594 KRT13P13646 458 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 ANO7Q6IWH7 933 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 LRIG3Q6UXM1 1119 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 MIGA2Q7L4E1 593 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 SGMS1Q86VZ5 419 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 P3H4Q92791 437 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 IFT74Q96LB3 600 aa19.94■□□□□ 0.78
PTPN12-201ENST00000248594 DNAJC17Q9NVM6 304 aaKnown RBP19.94■□□□□ 0.78
PTPN12-201ENST00000248594 C5orf60A6NFR6 353 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 SLC9C1Q4G0N8 1177 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 DZIP3Q86Y13 1208 aaKnown RBP19.93■□□□□ 0.78
PTPN12-201ENST00000248594 METTL5Q9NRN9 209 aaKnown RBP19.93■□□□□ 0.78
PTPN12-201ENST00000248594 SLC12A4Q9UP95 1085 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 WDR17Q8IZU2 1322 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 ADD2P35612 726 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 MTMR3Q13615 1198 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 DENND2CQ68D51 928 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 FAM114A1Q8IWE2 563 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 GPKOWQ92917 476 aaPredicted RBP eCLIP19.93■□□□□ 0.786e-8■■■□□ 16.5
PTPN12-201ENST00000248594 JAG2Q9Y219 1238 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 UTP11Q9Y3A2 253 aaKnown RBP19.93■□□□□ 0.78
PTPN12-201ENST00000248594 TNFRSF8P28908 595 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 ZNF268Q14587 947 aaPredicted RBP19.93■□□□□ 0.78
PTPN12-201ENST00000248594 LDHAL6AQ6ZMR3 332 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 MFN1Q8IWA4 741 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 KCNH5Q8NCM2 988 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 EPS8L3Q8TE67 593 aaKnown RBP19.93■□□□□ 0.78
PTPN12-201ENST00000248594 FMO2Q99518 471 aa19.93■□□□□ 0.78
PTPN12-201ENST00000248594 STK36Q9NRP7 1315 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 CYP2D7A0A087X1C5 515 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 F8VZ95 297 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 COPS2P61201 443 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 UBAP2Q5T6F2 1119 aaKnown RBP19.92■□□□□ 0.78
PTPN12-201ENST00000248594 UCMAQ8WVF2 138 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 RUBCNQ92622 972 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 NUDCD1Q96RS6 583 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 EPB41L4AQ9HCS5 686 aaPredicted RBP19.92■□□□□ 0.78
PTPN12-201ENST00000248594 TBC1D7Q9P0N9 293 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 FBXO3Q9UK99 471 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 INTUQ9ULD6 942 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 NOC2LQ9Y3T9 749 aaKnown RBP19.92■□□□□ 0.78
PTPN12-201ENST00000248594 RNF8O76064 485 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 GBP1P32455 592 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 DTHD1Q6ZMT9 781 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 SDR42E1Q8WUS8 393 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 LUC7LQ9NQ29 371 aaKnown RBP19.92■□□□□ 0.78
PTPN12-201ENST00000248594 RHBDL2Q9NX52 303 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 CACNA1FO60840 1977 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 TNKSO95271 1327 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 PHKG2P15735 406 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 FGFR4P22455 802 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 EPS15P42566 896 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 LIFRP42702 1097 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 KLHL30Q0D2K2 578 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 SLMAPQ14BN4 828 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 IFI16Q16666 785 aaKnown RBP19.92■□□□□ 0.78
PTPN12-201ENST00000248594 RASIP1Q5U651 963 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 SPATA21Q7Z572 469 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 DRAXINQ8NBI3 349 aaPredicted RBP19.92■□□□□ 0.78
PTPN12-201ENST00000248594 GLG1Q92896 1179 aa19.92■□□□□ 0.78
PTPN12-201ENST00000248594 LSM14BQ9BX40 385 aaKnown RBP19.92■□□□□ 0.78
PTPN12-201ENST00000248594 A0A087X0T9 212 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 PPFIA2O75334 1257 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 FAM228BP0C875 321 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 MIIPQ5JXC2 388 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 AGBL2Q5U5Z8 902 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 SFMBT2Q5VUG0 894 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 TMC3Q7Z5M5 1100 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 HOOK3Q86VS8 718 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 KIAA0825Q8IV33 1275 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 DDX50Q9BQ39 737 aaKnown RBP19.91■□□□□ 0.78
PTPN12-201ENST00000248594 DISC1Q9NRI5 854 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 CHCHD3Q9NX63 227 aaKnown RBP19.91■□□□□ 0.78
PTPN12-201ENST00000248594 TSKSQ9UJT2 592 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 SUN1O94901 812 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 CCNE1P24864 410 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 ADAM9Q13443 819 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 VWA3BQ502W6 1294 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 KLHL23Q8NBE8 558 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 INPP4AQ96PE3 977 aaPredicted RBP19.91■□□□□ 0.78
PTPN12-201ENST00000248594 CNOT10Q9H9A5 744 aaKnown RBP19.91■□□□□ 0.78
PTPN12-201ENST00000248594 MYH6P13533 1939 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 NWD1Q149M9 1564 aa19.91■□□□□ 0.78
PTPN12-201ENST00000248594 PHKA1P46020 1223 aa19.9■□□□□ 0.78
PTPN12-201ENST00000248594 ATP2C1P98194 919 aaPredicted RBP19.9■□□□□ 0.78
PTPN12-201ENST00000248594 CUL1Q13616 776 aa19.9■□□□□ 0.78
PTPN12-201ENST00000248594 FGD4Q96M96 766 aa19.9■□□□□ 0.78
PTPN12-201ENST00000248594 GORASP1Q9BQQ3 440 aa19.9■□□□□ 0.78
PTPN12-201ENST00000248594 KRT23Q9C075 422 aa19.9■□□□□ 0.78
PTPN12-201ENST00000248594 ZNF211Q13398 564 aaPredicted RBP19.9■□□□□ 0.78
PTPN12-201ENST00000248594 SLC29A2Q14542 456 aa19.9■□□□□ 0.78
PTPN12-201ENST00000248594 RFX8Q6ZV50 586 aa19.9■□□□□ 0.78
PTPN12-201ENST00000248594 PEX26Q7Z412 305 aa19.9■□□□□ 0.78
PTPN12-201ENST00000248594 ZC3H18Q86VM9 953 aaKnown RBP19.9■□□□□ 0.78
PTPN12-201ENST00000248594 SERPINB4P48594 390 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms