RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 CATSPER3Q86XQ3 398 aa28.18■■■□□ 2.1
RAB40C-201ENST00000248139 KCTD10Q9H3F6 313 aa28.18■■■□□ 2.1
RAB40C-201ENST00000248139 SIAH1Q8IUQ4 282 aa28.18■■■□□ 2.1
RAB40C-201ENST00000248139 PROM2Q8N271 834 aa28.18■■■□□ 2.1
RAB40C-201ENST00000248139 IKZF4Q9H2S9 585 aa28.18■■■□□ 2.1
RAB40C-201ENST00000248139 RBM12Q9NTZ6 932 aaKnown RBP28.18■■■□□ 2.1
RAB40C-201ENST00000248139 HYOU1Q9Y4L1 999 aa28.18■■■□□ 2.1
RAB40C-201ENST00000248139 ABCB11O95342 1321 aa28.17■■■□□ 2.1
RAB40C-201ENST00000248139 A0A087X0T9 212 aa28.17■■■□□ 2.1
RAB40C-201ENST00000248139 FAM228BP0C875 321 aa28.17■■■□□ 2.1
RAB40C-201ENST00000248139 HOXA13P31271 388 aaPredicted RBP28.17■■■□□ 2.1
RAB40C-201ENST00000248139 TRIM59Q8IWR1 403 aa28.17■■■□□ 2.1
RAB40C-201ENST00000248139 MSL3Q8N5Y2 521 aaKnown RBP28.17■■■□□ 2.1
RAB40C-201ENST00000248139 NT5C3AQ9H0P0 336 aa28.17■■■□□ 2.1
RAB40C-201ENST00000248139 KCNMB3Q9NPA1 279 aa28.17■■■□□ 2.1
RAB40C-201ENST00000248139 KLRC1P26715 233 aa28.17■■■□□ 2.1
RAB40C-201ENST00000248139 SLC9C1Q4G0N8 1177 aa28.17■■■□□ 2.1
RAB40C-201ENST00000248139 SH3BP5LQ7L8J4 393 aa28.17■■■□□ 2.1
RAB40C-201ENST00000248139 CEP72Q9P209 647 aa28.17■■■□□ 2.1
RAB40C-201ENST00000248139 RSPH10B2B2RC85 870 aa28.16■■■□□ 2.1
RAB40C-201ENST00000248139 RSPH10BP0C881 870 aa28.16■■■□□ 2.1
RAB40C-201ENST00000248139 CERKLQ49MI3 558 aaPredicted RBP28.16■■■□□ 2.1
RAB40C-201ENST00000248139 ACBD3Q9H3P7 528 aa28.16■■■□□ 2.1
RAB40C-201ENST00000248139 GOLPH3Q9H4A6 298 aa28.16■■■□□ 2.1
RAB40C-201ENST00000248139 ZSCAN5CA6NGD5 496 aaPredicted RBP28.16■■■□□ 2.1
RAB40C-201ENST00000248139 PALMO75781 387 aa28.16■■■□□ 2.1
RAB40C-201ENST00000248139 PRPF6O94906 941 aaKnown RBP28.16■■■□□ 2.1
RAB40C-201ENST00000248139 GCFC2P16383 781 aaKnown RBP28.16■■■□□ 2.1
RAB40C-201ENST00000248139 IQCDQ96DY2 449 aa28.16■■■□□ 2.1
RAB40C-201ENST00000248139 MED4Q9NPJ6 270 aa28.16■■■□□ 2.1
RAB40C-201ENST00000248139 SLC9A1P19634 815 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 SLC12A3P55017 1021 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 ARHGAP4P98171 946 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 KCNH2Q12809 1159 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 NOX5Q96PH1 765 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 KLRG2A4D1S0 409 aaPredicted RBP28.15■■■□□ 2.1
RAB40C-201ENST00000248139 SFI1A8K8P3 1242 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 FAM86B1E9PN63 330 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 FAM86B2P0C5J1 330 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 NR2F2P24468 414 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 MCM3P25205 808 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 IRX5P78411 483 aaPredicted RBP28.15■■■□□ 2.1
RAB40C-201ENST00000248139 JAG1P78504 1218 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 HYIQ5T013 277 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 GOLGA5Q8TBA6 731 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 DHX36Q9H2U1 1008 aaKnown RBP28.15■■■□□ 2.1
RAB40C-201ENST00000248139 AFF2P51816 1311 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 KDM3AQ9Y4C1 1321 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 EPS15P42566 896 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 SPICE1Q8N0Z3 855 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 MMGT1Q8N4V1 131 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 VIPAS39Q9H9C1 493 aa28.15■■■□□ 2.1
RAB40C-201ENST00000248139 ESYT3A0FGR9 886 aa28.14■■■□□ 2.1
RAB40C-201ENST00000248139 AARSP49588 968 aaKnown RBP eCLIP28.14■■■□□ 2.13e-8■■■■■ 29.1
RAB40C-201ENST00000248139 HAUS3Q68CZ6 603 aa28.14■■■□□ 2.1
RAB40C-201ENST00000248139 LEKR1Q6ZMV7 388 aa28.14■■■□□ 2.1
RAB40C-201ENST00000248139 PJA2O43164 708 aa28.14■■■□□ 2.09
RAB40C-201ENST00000248139 MYBP10242 640 aa28.14■■■□□ 2.09
RAB40C-201ENST00000248139 KCNA1Q09470 495 aa28.14■■■□□ 2.09
RAB40C-201ENST00000248139 MAPK8IP2Q13387 824 aaPredicted RBP28.14■■■□□ 2.09
RAB40C-201ENST00000248139 SFR1Q86XK3 245 aa28.14■■■□□ 2.09
RAB40C-201ENST00000248139 AENQ8WTP8 325 aaKnown RBP28.14■■■□□ 2.09
RAB40C-201ENST00000248139 FAM198AQ9UFP1 575 aa28.14■■■□□ 2.09
RAB40C-201ENST00000248139 SMCHD1A6NHR9 2005 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 SERPING1P05155 500 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 TCP1P17987 556 aaKnown RBP28.13■■■□□ 2.09
RAB40C-201ENST00000248139 POLD1P28340 1107 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 HOXD13P35453 343 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 SPIRE1Q08AE8 756 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 IQCEQ6IPM2 695 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 REEP2Q9BRK0 252 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 SSU72P8A0A1W2PR75 194 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 KLHL30Q0D2K2 578 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 KIAA0753Q2KHM9 967 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 MUM1L1Q5H9M0 696 aa28.13■■■□□ 2.09
RAB40C-201ENST00000248139 ZNF622Q969S3 477 aaKnown RBP eCLIP28.13■■■□□ 2.09
RAB40C-201ENST00000248139 ANKRD65E5RJM6 399 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 F5H6K3 240 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 SPATA31C1P0DKV0 1188 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 KLRC3Q07444 240 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 GIT2Q14161 759 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 HHIPL2Q6UWX4 724 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 AFAP1L1Q8TED9 768 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 RABEP2Q9H5N1 569 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 SUGT1Q9Y2Z0 365 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 LTBP1Q14766 1721 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 MSL1Q68DK7 614 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 CCDC70Q6NSX1 233 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 ETNPPLQ8TBG4 499 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 CEP63Q96MT8 703 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 RGL1Q9NZL6 768 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 FAM184BQ9ULE4 1060 aa28.12■■■□□ 2.09
RAB40C-201ENST00000248139 ICA1Q05084 483 aa28.11■■■□□ 2.09
RAB40C-201ENST00000248139 DCAF17Q5H9S7 520 aaPredicted RBP28.11■■■□□ 2.09
RAB40C-201ENST00000248139 TSEN2Q8NCE0 465 aaKnown RBP28.11■■■□□ 2.09
RAB40C-201ENST00000248139 HDAC9Q9UKV0 1011 aa28.11■■■□□ 2.09
RAB40C-201ENST00000248139 GOLGA6BA6NDN3 693 aa28.11■■■□□ 2.09
RAB40C-201ENST00000248139 CLIC2O15247 247 aa28.11■■■□□ 2.09
RAB40C-201ENST00000248139 PAFAH1B1P43034 410 aa28.11■■■□□ 2.09
RAB40C-201ENST00000248139 LRRC31Q6UY01 552 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms