RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 PCDHAC2Q9Y5I4 1007 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 PLCH1Q4KWH8 1693 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 SHTN1A0MZ66 631 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 OPA1O60313 960 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 FAM13AO94988 1023 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 HPDP32754 393 aaPredicted RBP13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 USP8P40818 1118 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 GNGT1P63211 74 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 ODF2Q5BJF6 829 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 CDC42EP5Q6NZY7 148 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 ADAT2Q7Z6V5 191 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 VPS36Q86VN1 386 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 BBXQ8WY36 941 aaPredicted RBP13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 CEP72Q9P209 647 aa13.86□□□□□ -0.19
RAB3IP-201ENST00000247833 A0A087X0T9 212 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 GOLGA6L10A6NI86 522 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 FAM228BP0C875 321 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 SLC9A1P19634 815 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 ABCB4P21439 1286 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 CCT5P48643 541 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 RPS6KA1Q15418 735 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 EXOC3L4Q17RC7 722 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 LRRC55Q6ZSA7 311 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 IFT20Q8IY31 132 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 SNED1Q8TER0 1413 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 DDX39AO00148 427 aaKnown RBP13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 IL1R1P14778 569 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 NT5C2P49902 561 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 ARHGAP4P98171 946 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 FIGNQ5HY92 759 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 NAA35Q5VZE5 725 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 MYCT1Q8N699 235 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 CASZ1Q86V15 1759 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 TARSL2A2RTX5 802 aaKnown RBP13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 MED24O75448 989 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 GCFC2P16383 781 aaKnown RBP13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 PSMC6P62333 389 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 CCDC174Q6PII3 467 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 FBXO11Q86XK2 927 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 SH2D3CQ8N5H7 860 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 U2AF1L4Q8WU68 220 aaKnown RBP13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 KCNQ5Q9NR82 932 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 BCS1LQ9Y276 419 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 ATP6V0A2Q9Y487 856 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 ROBO3Q96MS0 1386 aa13.85□□□□□ -0.19
RAB3IP-201ENST00000247833 KCNMA1Q12791 1236 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 SYCP3Q8IZU3 236 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 CERS5Q8N5B7 392 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 BCAS4Q8TDM0 211 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 AP1M1Q9BXS5 423 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 SAMM50Q9Y512 469 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 ARAP2Q8WZ64 1704 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 PPP1R12BO60237 982 aaPredicted RBP13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 SYF2O95926 243 aaKnown RBP13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 EPB41P11171 864 aaKnown RBP13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 CYP2J2P51589 502 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 SEMA3FQ13275 785 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 CTTNQ14247 550 aaKnown RBP13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 TBC1D10BQ4KMP7 808 aaPredicted RBP13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 COA1Q9GZY4 146 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 GOLGB1Q14789 3259 aaKnown RBP13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 RSPH10B2B2RC85 870 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 GNA14O95837 355 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 RSPH10BP0C881 870 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 SHMT1P34896 483 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 CARSP49589 748 aaKnown RBP13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 EPHB4P54760 987 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 SEPT12Q8IYM1 358 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 PROM2Q8N271 834 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 BAP1Q92560 729 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 DNAJC19Q96DA6 116 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 TLR10Q9BXR5 811 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 EHD4Q9H223 541 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 DHX36Q9H2U1 1008 aaKnown RBP13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 ZBTB21Q9ULJ3 1066 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 ROBO1Q9Y6N7 1651 aa13.84□□□□□ -0.19
RAB3IP-201ENST00000247833 CYP11B2P19099 503 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 CRKP46108 304 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 ARHGAP44Q17R89 818 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 SCFD1Q8WVM8 642 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 AMNQ9BXJ7 453 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 CAPS2Q9BXY5 557 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 NUCKS1Q9H1E3 243 aaKnown RBP13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 H0YHG0 523 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 KRT14P02533 472 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 MYBP10242 640 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 CASP5P51878 434 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 TNNC1P63316 161 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 PPP4R3AQ6IN85 833 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 MICALL1Q8N3F8 863 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 PSD3Q9NYI0 1048 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 EBAG9O00559 213 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 GFPT2O94808 682 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 PAK2Q13177 524 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 PDCLQ13371 301 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 ORC2Q13416 577 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms