RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 SNAP25P60880 206 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 LMNB2Q03252 620 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 PFKFB3Q16875 520 aaPredicted RBP21.49■■□□□ 1.03
SOX4-201ENST00000244745 TBC1D1Q86TI0 1168 aaPredicted RBP21.49■■□□□ 1.03
SOX4-201ENST00000244745 NEK9Q8TD19 979 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 CDK8P49336 464 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 CUL1Q13616 776 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 BRIP1Q9BX63 1249 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 SCOCQ9UIL1 159 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 TACC3Q9Y6A5 838 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 NCK2O43639 380 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 TMEM191BP0C7N4 346 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 TXLNGQ9NUQ3 528 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 USP21Q9UK80 565 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 CHUKO15111 745 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 CYP2C19P33261 490 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 KCNQ4P56696 695 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 SYNE4Q8N205 404 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 SUGCTQ9HAC7 445 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 STK32BQ9NY57 414 aa21.49■■□□□ 1.03
SOX4-201ENST00000244745 TULP4Q9NRJ4 1543 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 REREQ9P2R6 1566 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 GIPC1O14908 333 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 INHBAP08476 426 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 GABPAQ06546 454 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 HAUS1Q96CS2 278 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 CCDC17Q96LX7 622 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 SCYL1Q96KG9 808 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 BPIFB4P59827 614 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 CCZ1BP86790 482 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 CCZ1P86791 482 aaPredicted RBP21.48■■□□□ 1.03
SOX4-201ENST00000244745 RCN2Q14257 317 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 ARHGEF18Q6ZSZ5 1173 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 SH3RF3Q8TEJ3 882 aaPredicted RBP21.48■■□□□ 1.03
SOX4-201ENST00000244745 MED10Q9BTT4 135 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 RASGRF2O14827 1237 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 KRT1P04264 644 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 UNC13DQ70J99 1090 aa21.48■■□□□ 1.03
SOX4-201ENST00000244745 SH3BP5O60239 455 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 FGGP02679 453 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 MTF1Q14872 753 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 SCYL3Q8IZE3 742 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 TRIM11Q96F44 468 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 GPR101Q96P66 508 aaPredicted RBP21.47■■□□□ 1.03
SOX4-201ENST00000244745 WDR24Q96S15 920 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 KMT5AQ9NQR1 393 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 SETBP1Q9Y6X0 1596 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 SNAP23O00161 211 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 RINT1Q6NUQ1 792 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 NFRKBQ6P4R8 1299 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.47■■□□□ 1.03
SOX4-201ENST00000244745 CTTNQ14247 550 aaKnown RBP21.47■■□□□ 1.03
SOX4-201ENST00000244745 SLMAPQ14BN4 828 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 ENAHQ8N8S7 591 aaPredicted RBP21.47■■□□□ 1.03
SOX4-201ENST00000244745 NACC1Q96RE7 527 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 CEP72Q9P209 647 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 PNMA6FA0A0J9YX94 578 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 POLR2BP30876 1174 aaKnown RBP21.47■■□□□ 1.03
SOX4-201ENST00000244745 ALKBH5Q6P6C2 394 aaKnown RBP21.47■■□□□ 1.03
SOX4-201ENST00000244745 ANKRD35Q8N283 1001 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 DDIT3P35638 169 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 DYNLT1P63172 113 aa21.47■■□□□ 1.03
SOX4-201ENST00000244745 DNAJC17Q9NVM6 304 aaKnown RBP21.47■■□□□ 1.03
SOX4-201ENST00000244745 NOP53Q9NZM5 478 aaKnown RBP21.47■■□□□ 1.03
SOX4-201ENST00000244745 NPHP4O75161 1426 aaPredicted RBP21.46■■□□□ 1.03
SOX4-201ENST00000244745 SAT1P21673 171 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 HOOK2Q96ED9 719 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 SRLQ86TD4 932 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 PARVGQ9HBI0 331 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 AS3MTQ9HBK9 375 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 CEP152O94986 1710 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 POTEMA6NI47 508 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 SFI1A8K8P3 1242 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 RNF8O76064 485 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 CDC37Q16543 378 aaPredicted RBP21.46■■□□□ 1.03
SOX4-201ENST00000244745 TSGA10IPQ3SY00 556 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 GLE1Q53GS7 698 aaKnown RBP21.46■■□□□ 1.03
SOX4-201ENST00000244745 SYDE2Q5VT97 1194 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 ADGRL3Q9HAR2 1447 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 CYP27B1O15528 508 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 ACTN3Q08043 901 aaPredicted RBP21.46■■□□□ 1.03
SOX4-201ENST00000244745 METTL16Q86W50 562 aaKnown RBP21.46■■□□□ 1.03
SOX4-201ENST00000244745 TMEM206Q9H813 350 aa21.46■■□□□ 1.03
SOX4-201ENST00000244745 FOXO4P98177 505 aa21.45■■□□□ 1.02
SOX4-201ENST00000244745 PAGR1Q9BTK6 254 aa21.45■■□□□ 1.02
SOX4-201ENST00000244745 VCX3AQ9NNX9 186 aa21.45■■□□□ 1.02
SOX4-201ENST00000244745 SERPINB13Q9UIV8 391 aa21.45■■□□□ 1.02
SOX4-201ENST00000244745 ARAP3Q8WWN8 1544 aa21.45■■□□□ 1.02
SOX4-201ENST00000244745 EIF3BP55884 814 aaKnown RBP21.45■■□□□ 1.02
SOX4-201ENST00000244745 TSPYL2Q9H2G4 693 aaPredicted RBP21.45■■□□□ 1.02
SOX4-201ENST00000244745 CPVLQ9H3G5 476 aa21.45■■□□□ 1.02
SOX4-201ENST00000244745 BSDC1Q9NW68 430 aaPredicted RBP21.45■■□□□ 1.02
SOX4-201ENST00000244745 CSRNP1Q96S65 589 aa21.45■■□□□ 1.02
SOX4-201ENST00000244745 HOXA13P31271 388 aaPredicted RBP21.45■■□□□ 1.02
SOX4-201ENST00000244745 TSC22D3Q99576 134 aa21.45■■□□□ 1.02
SOX4-201ENST00000244745 IVNS1ABPQ9Y6Y0 642 aa21.45■■□□□ 1.02
SOX4-201ENST00000244745 ADGRB3O60242 1522 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 IQSEC2Q5JU85 1478 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 CLRN2A0PK11 232 aa21.44■■□□□ 1.02
SOX4-201ENST00000244745 MAP3K7O43318 606 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms