RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 NRXN2Q9P2S2 1712 aa13.18□□□□□ -0.3
SEC61A1-201ENST00000243253 PALMO75781 387 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 SERPING1P05155 500 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 SF3A3Q12874 501 aaKnown RBP eCLIP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 COASYQ13057 564 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 CDC37Q16543 378 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 TTC31Q49AM3 519 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 EIF1ADQ8N9N8 165 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 SCFD2Q8WU76 684 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 CRYGNQ8WXF5 182 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 NLRC4Q9NPP4 1024 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 ATP8B3O60423 1300 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 UBR3Q6ZT12 1888 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 hCG_1984214I3L0E3 225 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 BTDP43251 543 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 ZYXQ15942 572 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 UAP1Q16222 522 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 CALCRLQ16602 461 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 ZNF713Q8N859 430 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 FAM163AQ96GL9 167 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 RNPC3Q96LT9 517 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 GAKO14976 1311 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 KRT18P05783 430 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 HSPA9P38646 679 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 GNGT1P63211 74 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 TDRD12Q587J7 1177 aaKnown RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 KCTD1Q719H9 257 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 WDR66Q8TBY9 1149 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 BCAS4Q8TDM0 211 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 SEC14L1Q92503 715 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 EYA3Q99504 573 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 NFU1Q9UMS0 254 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
SEC61A1-201ENST00000243253 ARSHQ5FYA8 562 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 C6orf89Q6UWU4 347 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 USP38Q8NB14 1042 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 SCFD1Q8WVM8 642 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 NOX5Q96PH1 765 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 TSKSQ9UJT2 592 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 ESYT3A0FGR9 886 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 CNPY4Q8N129 248 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 PRPF38AQ8NAV1 312 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 ALS2CR12Q96Q35 445 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 PKD2L1Q9P0L9 805 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 STXBP5LQ9Y2K9 1186 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 THSD7AQ9UPZ6 1657 aa13.16□□□□□ -0.3
SEC61A1-201ENST00000243253 IL1R1P14778 569 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 USH1GQ495M9 461 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 SWT1Q5T5J6 900 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 TTC19Q6DKK2 380 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 C8orf74Q6P047 294 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 YTHDF3Q7Z739 585 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 OPA1O60313 960 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 SPIRE1Q08AE8 756 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 CFAP221Q4G0U5 840 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 SLFN11Q7Z7L1 901 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 CEP63Q96MT8 703 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 MBOAT7Q96N66 472 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 NEUROG2Q9H2A3 272 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 SRRM3A6NNA2 597 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 RAD51CO43502 376 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 AKR1B10O60218 316 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 ERVK-9P63128 1117 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 FKBP3Q00688 224 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 EPM2AIP1Q7L775 607 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 SPICE1Q8N0Z3 855 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 RBM46Q8TBY0 533 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 NYXQ9GZU5 481 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 LRRC4CQ9HCJ2 640 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 EPB41L5Q9HCM4 733 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 SLC12A6Q9UHW9 1150 aa13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 PACSIN2Q9UNF0 486 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-201ENST00000243253 GUCY2CP25092 1073 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 LSP1P33241 339 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 POU5F1Q01860 360 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 PDCLQ13371 301 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 SEPT2Q15019 361 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 CENPHQ9H3R5 247 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 HEXIM1O94992 359 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 SLC12A3P55017 1021 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 UBXN2AP68543 259 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 PLS1Q14651 629 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 KIAA0825Q8IV33 1275 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 JMJD4Q9H9V9 463 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 SIX2Q9NPC8 291 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 LEMD3Q9Y2U8 911 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 FSBPO95073 299 aa13.14□□□□□ -0.31
SEC61A1-201ENST00000243253 JAM2P57087 298 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms