RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 FLOT2Q14254 428 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 KIF22Q14807 665 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 TRIM67Q6ZTA4 783 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 TRIM55Q9BYV6 548 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 AS3MTQ9HBK9 375 aa7.27□□□□□ -1.25
CSMD2-201ENST00000241312 FGGP02679 453 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 MXI1P50539 228 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SCRN1Q12765 414 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SPOUT1Q5T280 376 aaKnown RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 DARS2Q6PI48 645 aaKnown RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 TTLL7Q6ZT98 887 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 PTH1RQ03431 593 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 PCDHA5Q9Y5H7 936 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 PTPRTO14522 1441 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 LRRN2O75325 713 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 CHGBP05060 677 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 NFKBIAP25963 317 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 CAV1Q03135 178 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 FBXO38Q6PIJ6 1188 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 RUBCNQ92622 972 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SLC12A1Q13621 1099 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 LLGL1Q15334 1064 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 ARL13BQ3SXY8 428 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 ZNF658Q5TYW1 1059 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 FBXO11Q86XK2 927 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 FAM133AQ8N9E0 248 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SNX25Q9H3E2 840 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 ZFP69BQ9UJL9 534 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 ALAS1P13196 640 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 RBL2Q08999 1139 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 DLGAP5Q15398 846 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 NHEJ1Q9H9Q4 299 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 ARHGAP10A1A4S6 786 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 ZBED1O96006 694 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 OCA2Q04671 838 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 MORF4L2Q15014 288 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 PLA2G4DQ86XP0 818 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 NCLNQ969V3 563 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 STOML1Q9UBI4 398 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 CSADQ9Y600 493 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 ATP10BO94823 1461 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 USP17L12C9JPN9 530 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 USP17L21D6R901 530 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 PPARGP37231 505 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 PSMD2Q13200 908 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 BZW1Q7L1Q6 419 aaKnown RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SIX6OS1Q8N1H7 587 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 ACCSQ96QU6 501 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SYCE1LA8MT33 242 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 ESRRAP11474 423 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 HIBCHQ6NVY1 386 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 APOA5Q6Q788 366 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 RNF169Q8NCN4 708 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 DEPDC1BQ8WUY9 529 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SEPT8Q92599 483 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 AMNQ9BXJ7 453 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 TBK1Q9UHD2 729 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 CROCC2H7BZ55 1655 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 TPRP12270 2363 aaKnown RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 BTBD18B2RXH4 712 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 ERVV-2B6SEH9 535 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 H0YIN7 160 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 NDUFA10O95299 355 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SERPINB10P48595 397 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 YWHAHQ04917 246 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 RARS2Q5T160 578 aaKnown RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SESTD1Q86VW0 696 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 IFNL3Q8IZI9 196 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SPDYE1Q8NFV5 336 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 MTBPQ96DY7 904 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 FAM193BQ96PV7 902 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 USP40Q9NVE5 1235 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 CLIC4Q9Y696 253 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 FMNL1O95466 1100 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 PDIA3P30101 505 aaKnown RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 C11orf57Q6ZUT1 292 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 OR9Q1Q8NGQ5 310 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 NRBP2Q9NSY0 501 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 KIF17Q9P2E2 1029 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 DIS3Q9Y2L1 958 aaKnown RBP7.26□□□□□ -1.25
CSMD2-201ENST00000241312 KDM5CP41229 1560 aa7.26□□□□□ -1.25
CSMD2-201ENST00000241312 SOWAHDA6NJG2 315 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 SERPING1P05155 500 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 E2F4Q16254 413 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 LRRC37BQ96QE4 947 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 SLC12A6Q9UHW9 1150 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 PZPP20742 1482 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 FRMPD2Q68DX3 1309 aaPredicted RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 MYO1CO00159 1063 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 THOC5Q13769 683 aaKnown RBP7.25□□□□□ -1.25
CSMD2-201ENST00000241312 POLA2Q14181 598 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 BBS9Q3SYG4 887 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 PYROXD1Q8WU10 500 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 FAM149B1Q96BN6 582 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 CALN1Q9BXU9 219 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 DONSONQ9NYP3 566 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 A0A0G2JND7 137 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 UBAP1LF5GYI3 381 aa7.25□□□□□ -1.25
CSMD2-201ENST00000241312 CCDC188H7C350 402 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms