RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PLCB4Q15147 1175 aa17.02■□□□□ 0.31
DDX55-201ENST00000238146 DIXDC1Q155Q3 683 aa17.02■□□□□ 0.31
DDX55-201ENST00000238146 ASIC2Q16515 512 aa17.02■□□□□ 0.31
DDX55-201ENST00000238146 FAM26FQ5R3K3 315 aa17.02■□□□□ 0.31
DDX55-201ENST00000238146 CEP63Q96MT8 703 aa17.02■□□□□ 0.31
DDX55-201ENST00000238146 UBA5Q9GZZ9 404 aa17.02■□□□□ 0.31
DDX55-201ENST00000238146 NEUROG2Q9H2A3 272 aa17.02■□□□□ 0.31
DDX55-201ENST00000238146 KLC4Q9NSK0 619 aa17.02■□□□□ 0.31
DDX55-201ENST00000238146 GMNCA6NCL1 334 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 BHMG1C9JSJ3 638 aaPredicted RBP17.01■□□□□ 0.31
DDX55-201ENST00000238146 MARSP56192 900 aaKnown RBP17.01■□□□□ 0.31
DDX55-201ENST00000238146 BICDL1Q6ZP65 573 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 PROCA1Q8NCQ7 364 aaPredicted RBP17.01■□□□□ 0.31
DDX55-201ENST00000238146 LRRC45Q96CN5 670 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 GANQ9H2C0 597 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 CXorf56Q9H5V9 222 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 CD248Q9HCU0 757 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 PANK4Q9NVE7 773 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 TBC1D7Q9P0N9 293 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 BTNL10A8MVZ5 291 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 CEP104O60308 925 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 CTNNA1P35221 906 aaKnown RBP17.01■□□□□ 0.31
DDX55-201ENST00000238146 MAPKAPK5Q8IW41 473 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 EYA3Q99504 573 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 ANKRD2Q9GZV1 360 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 DDX20Q9UHI6 824 aaKnown RBP17.01■□□□□ 0.31
DDX55-201ENST00000238146 MAST2Q6P0Q8 1798 aa17.01■□□□□ 0.31
DDX55-201ENST00000238146 SART1O43290 800 aaKnown RBP17■□□□□ 0.31
DDX55-201ENST00000238146 TRAPPC3O43617 180 aa17■□□□□ 0.31
DDX55-201ENST00000238146 GNA14O95837 355 aa17■□□□□ 0.31
DDX55-201ENST00000238146 LDHBP07195 334 aaKnown RBP17■□□□□ 0.31
DDX55-201ENST00000238146 SMARCA1P28370 1054 aa17■□□□□ 0.31
DDX55-201ENST00000238146 PTK2Q05397 1052 aa17■□□□□ 0.31
DDX55-201ENST00000238146 DRP2Q13474 957 aa17■□□□□ 0.31
DDX55-201ENST00000238146 NELFCDQ8IXH7 590 aa17■□□□□ 0.31
DDX55-201ENST00000238146 ACTRT1Q8TDG2 376 aa17■□□□□ 0.31
DDX55-201ENST00000238146 PBKQ96KB5 322 aa17■□□□□ 0.31
DDX55-201ENST00000238146 AP1M1Q9BXS5 423 aa17■□□□□ 0.31
DDX55-201ENST00000238146 CHUKO15111 745 aa17■□□□□ 0.31
DDX55-201ENST00000238146 TMOD1P28289 359 aa17■□□□□ 0.31
DDX55-201ENST00000238146 GRIK5Q16478 980 aa17■□□□□ 0.31
DDX55-201ENST00000238146 SLC10A5Q5PT55 438 aa17■□□□□ 0.31
DDX55-201ENST00000238146 LRRC57Q8N9N7 239 aa17■□□□□ 0.31
DDX55-201ENST00000238146 ZKSCAN4Q969J2 545 aaPredicted RBP17■□□□□ 0.31
DDX55-201ENST00000238146 COA7Q96BR5 231 aa17■□□□□ 0.31
DDX55-201ENST00000238146 SLC40A1Q9NP59 571 aa17■□□□□ 0.31
DDX55-201ENST00000238146 ZBTB48P10074 688 aaPredicted RBP16.99■□□□□ 0.31
DDX55-201ENST00000238146 FLT3P36888 993 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 CDK8P49336 464 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 BIRC3Q13489 604 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 SEPT2Q15019 361 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 QPCTQ16769 361 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 PTPROQ16827 1216 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 CCDC121Q6ZUS5 278 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 IRF2BP2Q7Z5L9 587 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 C3orf20Q8ND61 904 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 NEDD1Q8NHV4 660 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 SNED1Q8TER0 1413 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 PPP4CP60510 307 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 KCTD19Q17RG1 926 aaPredicted RBP16.99■□□□□ 0.31
DDX55-201ENST00000238146 SPRED3Q2MJR0 410 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 RUFY4Q6ZNE9 571 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 ZNF571Q7Z3V5 609 aaPredicted RBP16.99■□□□□ 0.31
DDX55-201ENST00000238146 DNAAF5Q86Y56 855 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 CALR3Q96L12 384 aaKnown RBP16.99■□□□□ 0.31
DDX55-201ENST00000238146 OSBPL7Q9BZF2 842 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 DDX47Q9H0S4 455 aaKnown RBP16.99■□□□□ 0.31
DDX55-201ENST00000238146 RIOX1Q9H6W3 641 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 CNOT8Q9UFF9 292 aaKnown RBP16.99■□□□□ 0.31
DDX55-201ENST00000238146 FBXL5Q9UKA1 691 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 PCDHA2Q9Y5H9 948 aa16.99■□□□□ 0.31
DDX55-201ENST00000238146 IRS2Q9Y4H2 1338 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 USP17L5A8MUK1 530 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 BAG3O95817 575 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 METTL13Q8N6R0 699 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 GJA10Q969M2 543 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 CEP95Q96GE4 821 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 BCCIPQ9P287 314 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDX55-201ENST00000238146 SSBP05455 408 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDX55-201ENST00000238146 ACTN1P12814 892 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 ADCY7P51828 1080 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 KCNH2Q12809 1159 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 C10orf76Q5T2E6 689 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 UBLCP1Q8WVY7 318 aaPredicted RBP16.98■□□□□ 0.31
DDX55-201ENST00000238146 KCTD10Q9H3F6 313 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 ZNF287Q9HBT7 754 aa16.98■□□□□ 0.31
DDX55-201ENST00000238146 PGRMC1O00264 195 aaKnown RBP16.97■□□□□ 0.31
DDX55-201ENST00000238146 DNM1LO00429 736 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 PPP2R2AP63151 447 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 DPY19L2P1Q6NXN4 242 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 C16orf86Q6ZW13 317 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 SCFD1Q8WVM8 642 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 HAS1Q92839 578 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 CCDC114Q96M63 670 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.97■□□□□ 0.317e-8■■■□□ 15.9
DDX55-201ENST00000238146 ACTR5Q9H9F9 607 aaPredicted RBP16.97■□□□□ 0.31
DDX55-201ENST00000238146 NOC2LQ9Y3T9 749 aaKnown RBP16.97■□□□□ 0.31
DDX55-201ENST00000238146 BACH1O14867 736 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms