RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 RAD21O60216 631 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 EPB41P11171 864 aaKnown RBP15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 HSD17B3P37058 310 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 ITFG2Q969R8 447 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 MTA3Q9BTC8 594 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 CCSER1Q9C0I3 900 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 ANAPC4Q9UJX5 808 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 ATXN2Q99700 1313 aaKnown RBP15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 MXRA7P84157 204 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 RPS6KA1Q15418 735 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 SOGA3Q5TF21 947 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 PDXDC1Q6P996 788 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 USP17L2Q6R6M4 530 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 NLRP3Q96P20 1036 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 AMACRQ9UHK6 382 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 USP54Q70EL1 1684 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 GNAT1P11488 350 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 MAGOHP61326 146 aaKnown RBP15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 ERVK-9P63128 1117 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 TNNC1P63316 161 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 MAGOHBQ96A72 148 aaKnown RBP15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 NUDT12Q9BQG2 462 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 CELF4Q9BZC1 486 aaKnown RBP15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 FBXL5Q9UKA1 691 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 KIF1AQ12756 1690 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 DAPK3O43293 454 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 EVI5O60447 810 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 ACTN1P12814 892 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 COPB2P35606 906 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 USP4Q13107 963 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 ZNF662Q6ZS27 426 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 TAX1BP1Q86VP1 789 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 ZNF444Q8N0Y2 327 aaPredicted RBP15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 SELENOSQ9BQE4 189 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 GDF3Q9NR23 364 aa15.46■□□□□ 0.07
PCDHB3-201ENST00000231130 HMGB1P1B2RPK0 211 aaPredicted RBP15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 KLRF2D3W0D1 207 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 PDHA1P08559 390 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 ITGB3BPQ13352 177 aaPredicted RBP15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 ANKS4BQ8N8V4 417 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 AGAP11Q8TF27 550 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 BAP1Q92560 729 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 IL17RBQ9NRM6 502 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 TLR2O60603 784 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 PRLRP16471 622 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 KCNMA1Q12791 1236 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 NONOQ15233 471 aaKnown RBP eCLIP15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 TCERG1LQ5VWI1 586 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 SNX29Q8TEQ0 813 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 TSG101Q99816 390 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 NEUROG2Q9H2A3 272 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 LRRC4CQ9HCJ2 640 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 A0A1W2PQJ5 194 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 PCK1P35558 622 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 KCNQ4P56696 695 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 SLC35G1Q2M3R5 365 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 MEX3CQ5U5Q3 659 aaKnown RBP15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 SPTY2D1Q68D10 685 aaPredicted RBP15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 MIS18BP1Q6P0N0 1132 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 DZIP1Q86YF9 867 aaKnown RBP15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 PRCCQ92733 491 aaPredicted RBP15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 DDX12PQ92771 950 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 BRIP1Q9BX63 1249 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 PAPOLBQ9NRJ5 636 aaKnown RBP15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 PANK4Q9NVE7 773 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 ATP8A1Q9Y2Q0 1164 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 CHD4Q14839 1912 aa15.45■□□□□ 0.06
PCDHB3-201ENST00000231130 VIMP08670 466 aaKnown RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 ITGA4P13612 1032 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 POLE2P56282 527 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 EIF6P56537 245 aaKnown RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 ICA1Q05084 483 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 LAMB3Q13751 1172 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 TAF11Q15544 211 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 C6orf89Q6UWU4 347 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 ZSCAN29Q8IWY8 852 aaPredicted RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 LARP4BQ92615 738 aaKnown RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 LUC7LQ9NQ29 371 aaKnown RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 CNOT8Q9UFF9 292 aaKnown RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 CTCFP49711 727 aaPredicted RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 CDC37Q16543 378 aaPredicted RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 HGSNATQ68CP4 663 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 CENPPQ6IPU0 288 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 C3orf67Q6ZVT6 689 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 ZNF34Q8IZ26 560 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 MAB21L3Q8N8X9 362 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 MARCH10Q8NA82 808 aaPredicted RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 FAM84BQ96KN1 310 aaPredicted RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 OSBPL1AQ9BXW6 950 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 TAF1DQ9H5J8 278 aaPredicted RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 BCL9LQ86UU0 1499 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 KRIT1O00522 736 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 SART1O43290 800 aaKnown RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 CTNND1O60716 968 aaKnown RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 DHX9Q08211 1270 aaKnown RBP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 KCNK18Q7Z418 384 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 CCDC197Q8NCU1 140 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 RAPGEF5Q92565 580 aa15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.44■□□□□ 0.06
PCDHB3-201ENST00000231130 KCPQ6ZWJ8 1503 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms