RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 EMILIN3Q9NT22 766 aa17.93■□□□□ 0.46
LTBR-201ENST00000228918 RRP15Q9Y3B9 282 aaKnown RBP17.93■□□□□ 0.46
LTBR-201ENST00000228918 SIPA1L1O43166 1804 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 KLRG2A4D1S0 409 aaPredicted RBP17.92■□□□□ 0.46
LTBR-201ENST00000228918 NAP1L1P55209 391 aaKnown RBP17.92■□□□□ 0.46
LTBR-201ENST00000228918 APBA1Q02410 837 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 NAB2Q15742 525 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 SLC18A3Q16572 532 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 QRICH1Q2TAL8 776 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 EMBQ6PCB8 327 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.92■□□□□ 0.46
LTBR-201ENST00000228918 SP8Q8IXZ3 490 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 UIMC1Q96RL1 719 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 GANQ9H2C0 597 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 KANSL2Q9H9L4 492 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 RNF14Q9UBS8 474 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 PITPNM2Q9BZ72 1349 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 CYP3A7-CYP3A51PA0A087WV96 503 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 TOM1O60784 492 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 SHOX2O60902 331 aaPredicted RBP17.92■□□□□ 0.46
LTBR-201ENST00000228918 MED24O75448 989 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 HLA-DOAP06340 250 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 CYP3A7P24462 503 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 USP11P51784 963 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 SLC12A3P55017 1021 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 RAPGEF1Q13905 1077 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 EDRF1Q3B7T1 1238 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 CFAP221Q4G0U5 840 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 CDC42EP5Q6NZY7 148 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 FAM76AQ8TAV0 307 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 TBC1D5Q92609 795 aa17.92■□□□□ 0.46
LTBR-201ENST00000228918 PALMO75781 387 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 GLE1Q53GS7 698 aaKnown RBP17.91■□□□□ 0.46
LTBR-201ENST00000228918 ARSHQ5FYA8 562 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 CAVIN3Q969G5 261 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 MS4A14Q96JA4 679 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 SH3GL2Q99962 352 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 MXD3Q9BW11 206 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 AIPL1Q9NZN9 384 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 RSPH14Q9UHP6 348 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 PCDHGC5Q9Y5F6 944 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 GOLGA6CA6NDK9 693 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 POLRMTO00411 1230 aaKnown RBP17.91■□□□□ 0.46
LTBR-201ENST00000228918 GOLGA6DP0CG33 693 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 KLRC1P26715 233 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 STAT3P40763 770 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 SCNN1DP51172 638 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 ADAM9Q13443 819 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 MOXD1Q6UVY6 613 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 EHD4Q9H223 541 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 DHX36Q9H2U1 1008 aaKnown RBP17.91■□□□□ 0.46
LTBR-201ENST00000228918 GOLGA6AQ9NYA3 693 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 PCDHA1Q9Y5I3 950 aa17.91■□□□□ 0.46
LTBR-201ENST00000228918 ANKRD31Q8N7Z5 1873 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 A0A087X0T9 212 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 POTEFA5A3E0 1075 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 FAM228BP0C875 321 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 POTEIP0CG38 1075 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 SLURP2P0DP57 97 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 POTEGQ6S5H5 508 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 POTEEQ6S8J3 1075 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 SLFN12Q8IYM2 578 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 FAM133AQ8N9E0 248 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 CCDC17Q96LX7 622 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 DNAJC18Q9H819 358 aa17.9■□□□□ 0.46
LTBR-201ENST00000228918 CETN3O15182 167 aa17.89■□□□□ 0.46
LTBR-201ENST00000228918 KRT18P05783 430 aaKnown RBP17.89■□□□□ 0.46
LTBR-201ENST00000228918 SPIRE1Q08AE8 756 aa17.89■□□□□ 0.46
LTBR-201ENST00000228918 KLHL30Q0D2K2 578 aa17.89■□□□□ 0.46
LTBR-201ENST00000228918 KCNH2Q12809 1159 aa17.89■□□□□ 0.46
LTBR-201ENST00000228918 NFIAQ12857 509 aa17.89■□□□□ 0.46
LTBR-201ENST00000228918 ASIC2Q16515 512 aa17.89■□□□□ 0.46
LTBR-201ENST00000228918 CDC37Q16543 378 aaPredicted RBP17.89■□□□□ 0.46
LTBR-201ENST00000228918 APOBEC3HQ6NTF7 200 aaKnown RBP17.89■□□□□ 0.46
LTBR-201ENST00000228918 HHIPL2Q6UWX4 724 aa17.89■□□□□ 0.46
LTBR-201ENST00000228918 TSEN2Q8NCE0 465 aaKnown RBP17.89■□□□□ 0.46
LTBR-201ENST00000228918 CRYGNQ8WXF5 182 aa17.89■□□□□ 0.46
LTBR-201ENST00000228918 PPFIA4O75335 1185 aa17.89■□□□□ 0.45
LTBR-201ENST00000228918 FTCDO95954 541 aa17.89■□□□□ 0.45
LTBR-201ENST00000228918 NR2F2P24468 414 aa17.89■□□□□ 0.45
LTBR-201ENST00000228918 EPS15P42566 896 aa17.89■□□□□ 0.45
LTBR-201ENST00000228918 NOP2P46087 812 aaKnown RBP17.89■□□□□ 0.45
LTBR-201ENST00000228918 AP3B2Q13367 1082 aa17.89■□□□□ 0.45
LTBR-201ENST00000228918 MEI1Q5TIA1 1274 aa17.89■□□□□ 0.45
LTBR-201ENST00000228918 ETNPPLQ8TBG4 499 aa17.89■□□□□ 0.45
LTBR-201ENST00000228918 DCAF4Q8WV16 495 aa17.89■□□□□ 0.45
LTBR-201ENST00000228918 NRXN2Q9P2S2 1712 aa17.89■□□□□ 0.45
LTBR-201ENST00000228918 GRID2IPA4D2P6 1211 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 GOLGA8KD6RF30 607 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 MEIS2O14770 477 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 TRIM66O15016 1216 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 CASP5P51878 434 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 ARID5AQ03989 594 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 NNTQ13423 1086 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 TEKT1Q969V4 418 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.88■□□□□ 0.45
LTBR-201ENST00000228918 PACSIN1Q9BY11 444 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 ZC3H12CQ9C0D7 883 aaKnown RBP17.88■□□□□ 0.45
LTBR-201ENST00000228918 GDF3Q9NR23 364 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms