RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SCARF1Q14162 830 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 TWF2Q6IBS0 349 aaKnown RBP20.05■□□□□ 0.8
CLIP2-201ENST00000223398 CDC42BPAQ5VT25 1732 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 OR6B3Q8NGW1 331 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 SCYL1Q96KG9 808 aa20.05■□□□□ 0.8
CLIP2-201ENST00000223398 RPAP3Q9H6T3 665 aaPredicted RBP20.05■□□□□ 0.8
CLIP2-201ENST00000223398 PLEKHG2Q9H7P9 1386 aa20.04■□□□□ 0.8
CLIP2-201ENST00000223398 AKR1B1P15121 316 aa20.04■□□□□ 0.8
CLIP2-201ENST00000223398 JAK3P52333 1124 aa20.04■□□□□ 0.8
CLIP2-201ENST00000223398 MAN2A1Q16706 1144 aa20.04■□□□□ 0.8
CLIP2-201ENST00000223398 GKAP1Q5VSY0 366 aaPredicted RBP20.04■□□□□ 0.8
CLIP2-201ENST00000223398 C11orf57Q6ZUT1 292 aaPredicted RBP20.04■□□□□ 0.8
CLIP2-201ENST00000223398 CIB2O75838 187 aa20.04■□□□□ 0.8
CLIP2-201ENST00000223398 CEP57Q86XR8 500 aa20.04■□□□□ 0.8
CLIP2-201ENST00000223398 ADGRB3O60242 1522 aa20.04■□□□□ 0.8
CLIP2-201ENST00000223398 FCER1AP12319 257 aa20.04■□□□□ 0.8
CLIP2-201ENST00000223398 PAGE5Q96GU1 130 aa20.04■□□□□ 0.8
CLIP2-201ENST00000223398 ESYT2A0FGR8 921 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 DENND3A2RUS2 1198 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 SGK1O00141 431 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 RBL2Q08999 1139 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 MTMR2Q13614 643 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 RNF17Q9BXT8 1623 aaKnown RBP20.03■□□□□ 0.8
CLIP2-201ENST00000223398 NDUFAB1O14561 156 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 CTNNA1P35221 906 aaKnown RBP20.03■□□□□ 0.8
CLIP2-201ENST00000223398 MTMR3Q13615 1198 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 ERCC6LQ2NKX8 1250 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 ZNF394Q53GI3 561 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 ATP6V0A4Q9HBG4 840 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 SAMSN1Q9NSI8 373 aaKnown RBP20.03■□□□□ 0.8
CLIP2-201ENST00000223398 CPSF3Q9UKF6 684 aaKnown RBP20.03■□□□□ 0.8
CLIP2-201ENST00000223398 IQGAP3Q86VI3 1631 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 GNAT1P11488 350 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 ATF2P15336 505 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 ADGRF4Q8IZF3 695 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 GDAQ9Y2T3 454 aa20.03■□□□□ 0.8
CLIP2-201ENST00000223398 EEF1GP26641 437 aaKnown RBP20.02■□□□□ 0.8
CLIP2-201ENST00000223398 STAT3P40763 770 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 SNX1Q13596 522 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 TTLL4Q14679 1199 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 QRICH1Q2TAL8 776 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 SWSAP1Q6NVH7 229 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 TCP11Q8WWU5 503 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 RILPQ96NA2 401 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 SLC12A6Q9UHW9 1150 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 CEP85LQ5SZL2 805 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 PRELPP51888 382 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 DNAJC24Q6P3W2 148 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 STMN2Q93045 179 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 DYDC2Q96IM9 177 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 TACC3Q9Y6A5 838 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 STK25O00506 426 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 ENC1O14682 589 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 HOXD10P28358 340 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 PFKFB3Q16875 520 aaPredicted RBP20.02■□□□□ 0.8
CLIP2-201ENST00000223398 BBS5Q8N3I7 341 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 PRPF38AQ8NAV1 312 aaKnown RBP20.02■□□□□ 0.8
CLIP2-201ENST00000223398 OXER1Q8TDS5 423 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 RNF139Q8WU17 664 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 P3H4Q92791 437 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 HAUS4Q9H6D7 363 aa20.02■□□□□ 0.8
CLIP2-201ENST00000223398 TNPO2O14787 897 aaKnown RBP20.02■□□□□ 0.79
CLIP2-201ENST00000223398 YWHAGP61981 247 aaKnown RBP eCLIP20.02■□□□□ 0.79
CLIP2-201ENST00000223398 PRPSAP1Q14558 356 aa20.02■□□□□ 0.79
CLIP2-201ENST00000223398 RHPN2Q8IUC4 686 aa20.02■□□□□ 0.79
CLIP2-201ENST00000223398 RGS16O15492 202 aaPredicted RBP20.01■□□□□ 0.79
CLIP2-201ENST00000223398 PHBP35232 272 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 DCLK2Q8N568 766 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 ZNF302Q9NR11 478 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 SH3GLB2Q9NR46 395 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 ZNF233A6NK53 670 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 GSG1L2A8MUP6 293 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 WDR64B1ANS9 1081 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 SPATA33Q96N06 139 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 CALN1Q9BXU9 219 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 MED7O43513 233 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 EZH2Q15910 746 aaKnown RBP20.01■□□□□ 0.79
CLIP2-201ENST00000223398 VSIG1Q86XK7 387 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 E9PMD0 336 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 RESTQ13127 1097 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 MFSD14CQ5VZR4 134 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 SPATA24Q86W54 205 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 ACAD9Q9H845 621 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 GABBR1Q9UBS5 961 aa20.01■□□□□ 0.79
CLIP2-201ENST00000223398 BZW2Q9Y6E2 419 aaKnown RBP20.01■□□□□ 0.79
CLIP2-201ENST00000223398 ACTN1P12814 892 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 MKRN1Q9UHC7 482 aaKnown RBP20■□□□□ 0.79
CLIP2-201ENST00000223398 ATP8B3O60423 1300 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 ZNF18P17022 549 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 ARHGAP4P98171 946 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 LRRC8AQ8IWT6 810 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 CCDC13Q8IYE1 715 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 GCNAQ96QF7 691 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 SMYD2Q9NRG4 433 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 ANAPC5Q9UJX4 755 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 RCOR1Q9UKL0 485 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 KRT1P04264 644 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 RPS6KA2Q15349 733 aa20■□□□□ 0.79
CLIP2-201ENST00000223398 ANGEL2Q5VTE6 544 aaKnown RBP20■□□□□ 0.79
CLIP2-201ENST00000223398 PADI6Q6TGC4 694 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms