RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 LENG9Q96B70 501 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 TMX3Q96JJ7 454 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 SDF4Q9BRK5 362 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 KATNAL1Q9BW62 490 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 UBE2OQ9C0C9 1292 aaKnown RBP14.41□□□□□ -0.1
LSM5-201ENST00000223084 NFASCO94856 1347 aa14.41□□□□□ -0.1
LSM5-201ENST00000223084 CCDC194A0A1B0GVG4 234 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 H3BRB1 525 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 DLL1O00548 723 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 DHX15O43143 795 aaKnown RBP14.4□□□□□ -0.1
LSM5-201ENST00000223084 TIMP1P01033 207 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 CYP2C18P33260 490 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 KRT2P35908 639 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 PTPN11Q06124 597 aaPredicted RBP14.4□□□□□ -0.1
LSM5-201ENST00000223084 HIC1Q14526 733 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 C7orf31Q8N865 590 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 GJA10Q969M2 543 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 CTAGE1Q96RT6 745 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 ZNF577Q9BSK1 485 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 TUT1Q9H6E5 874 aaKnown RBP14.4□□□□□ -0.1
LSM5-201ENST00000223084 GTF2IRD1Q9UHL9 959 aa14.4□□□□□ -0.1
LSM5-201ENST00000223084 BTBD18B2RXH4 712 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 IPO5O00410 1097 aaKnown RBP14.39□□□□□ -0.11
LSM5-201ENST00000223084 MSH4O15457 936 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 CCNE2O96020 404 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 MMP1P03956 469 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 SMIM10L2AP0DMW4 78 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 SMIM10L2BP0DMW5 78 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 MARK3P27448 753 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 BMP8BP34820 402 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 ACTR2P61160 394 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 SETQ01105 290 aaPredicted RBP14.39□□□□□ -0.11
LSM5-201ENST00000223084 TRIM29Q14134 588 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 PTGISQ16647 500 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 SESTD1Q86VW0 696 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 TNFRSF25Q93038 417 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 PCYT2Q99447 389 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 NOC4LQ9BVI4 516 aaKnown RBP14.39□□□□□ -0.11
LSM5-201ENST00000223084 HIPK3Q9H422 1215 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 NOD1Q9Y239 953 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 KAT6AQ92794 2004 aa14.39□□□□□ -0.11
LSM5-201ENST00000223084 RBAK-RBAKDNI3L0D1 243 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 SUPT20HL2P0C7V6 817 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 EPHB4P54760 987 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 CCL23P55773 120 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 HMGN5P82970 282 aaKnown RBP14.38□□□□□ -0.11
LSM5-201ENST00000223084 LETM2Q2VYF4 491 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 NEK8Q86SG6 692 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 DIS3L2Q8IYB7 885 aaKnown RBP14.38□□□□□ -0.11
LSM5-201ENST00000223084 FAM184AQ8NB25 1140 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 DHX38Q92620 1227 aaKnown RBP14.38□□□□□ -0.11
LSM5-201ENST00000223084 GLG1Q92896 1179 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 C8orf76Q96K31 380 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 RNPEPQ9H4A4 650 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 BRMS1Q9HCU9 246 aa14.38□□□□□ -0.11
LSM5-201ENST00000223084 ZNF215Q9UL58 517 aaPredicted RBP14.38□□□□□ -0.11
LSM5-201ENST00000223084 RANBP2P49792 3224 aaKnown RBP14.37□□□□□ -0.11
LSM5-201ENST00000223084 CUL9Q8IWT3 2517 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 CYP3A7-CYP3A51PA0A087WV96 503 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 SLC37A4O43826 429 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 LGR5O75473 907 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 CSF2RAP15509 400 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 CYP3A7P24462 503 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 MCM2P49736 904 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 Q4G0T1 1027 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 MFSD5Q6N075 450 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 MBOAT7Q96N66 472 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 WNT8AQ9H1J5 351 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 SETD4Q9NVD3 440 aa14.37□□□□□ -0.11
LSM5-201ENST00000223084 C17orf102A2RUQ5 167 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 ATG7O95352 703 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 ACRP10323 421 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 FXR1P51114 621 aaKnown RBP eCLIP14.36□□□□□ -0.11
LSM5-201ENST00000223084 FPGSQ05932 587 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 SHHQ15465 462 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 C9orf50Q5SZB4 431 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 MOXD1Q6UVY6 613 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 IL27Q8NEV9 243 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 SLC5A5Q92911 643 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 WNT8BQ93098 351 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 SCLYQ96I15 445 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 SMARCAD1Q9H4L7 1026 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 AZI2Q9H6S1 392 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 TBC1D22BQ9NU19 505 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 ERAP1Q9NZ08 941 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 DDX25Q9UHL0 483 aaKnown RBP14.36□□□□□ -0.11
LSM5-201ENST00000223084 EMSYQ7Z589 1322 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 SCN5AQ14524 2016 aa14.36□□□□□ -0.11
LSM5-201ENST00000223084 WNT7AO00755 349 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 BACH1O14867 736 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 TREHO43280 583 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 CCNT1O60563 726 aaKnown RBP14.35□□□□□ -0.11
LSM5-201ENST00000223084 GAS7O60861 476 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 STAT5BP51692 787 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 LRCH2Q5VUJ6 765 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 SWSAP1Q6NVH7 229 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 CCDC60Q8IWA6 550 aaPredicted RBP14.35□□□□□ -0.11
LSM5-201ENST00000223084 TDHQ8IZJ6 230 aa14.35□□□□□ -0.11
LSM5-201ENST00000223084 TMEM199Q8N511 208 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 263.1 ms