RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 CCDC172P0C7W6 258 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 KRT27Q7Z3Y8 459 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 KRT12Q99456 494 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 L1RE1Q9UN81 338 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 ABCB4P21439 1286 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 LRCH2Q5VUJ6 765 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 CPXCR1Q8N123 301 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 HNRNPLLQ8WVV9 542 aaKnown RBP16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 H3BQF6 201 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 C4AP0C0L4 1744 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 C4BP0C0L5 1744 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 PAK2Q13177 524 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 CTTNQ14247 550 aaKnown RBP16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 TMEM179Q6ZVK1 233 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 GLIS3Q8NEA6 775 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 GOLGA5Q8TBA6 731 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 CEP63Q96MT8 703 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 MMTAG2Q9BU76 263 aaKnown RBP16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 ARHGAP20Q9P2F6 1191 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 REXO2Q9Y3B8 237 aaKnown RBP16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 CAPN6Q9Y6Q1 641 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 TMEM110-MUSTN1A8MSY1 372 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 PALMO75781 387 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 PPP4R3AQ6IN85 833 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 FAM178BQ8IXR5 827 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 SH2D4AQ9H788 454 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 SUGT1Q9Y2Z0 365 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 SPATA4Q8NEY3 305 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 DCAF4Q8WV16 495 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 EPB41L5Q9HCM4 733 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 PACSIN2Q9UNF0 486 aaPredicted RBP16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 DOT1LQ8TEK3 1739 aa16.41■□□□□ 0.22
UBE2D4-201ENST00000222402 A0A1W2PQJ5 194 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 HEXIM1O94992 359 aaKnown RBP16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 STAT1P42224 750 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 AP3B2Q13367 1082 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 PODNQ7Z5L7 613 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 RIN2Q8WYP3 895 aaPredicted RBP16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 METTL14Q9HCE5 456 aaKnown RBP16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 MCTP2Q6DN12 878 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 COG1Q8WTW3 980 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 LRRC1Q9BTT6 524 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 TRIM31Q9BZY9 425 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 STK24Q9Y6E0 443 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 H2AFZP0C0S5 128 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 TNFAIP3P21580 790 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 USP11P51784 963 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 PPFIA1Q13136 1202 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 H2AFVQ71UI9 128 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 CTNNBL1Q8WYA6 563 aaPredicted RBP16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 MASTLQ96GX5 879 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 MTMR9Q96QG7 549 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 HOMER2Q9NSB8 354 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 EHD2Q9NZN4 543 aa16.4■□□□□ 0.22
UBE2D4-201ENST00000222402 MYH15Q9Y2K3 1946 aa16.39■□□□□ 0.22
UBE2D4-201ENST00000222402 GCOM1H8Y6P7 765 aaPredicted RBP16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 POLR2MP0CAP2 368 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 DAAM2Q86T65 1068 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 GCNT4Q9P109 453 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 RCCD1A6NED2 376 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 DLGAP5Q15398 846 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 GGCXP38435 758 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 MEA1Q16626 185 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 FIGNQ5HY92 759 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 ODR4Q5SWX8 454 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 TTC19Q6DKK2 380 aaPredicted RBP16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 RGL1Q9NZL6 768 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 STIM2Q9P246 746 aa16.39■□□□□ 0.21
UBE2D4-201ENST00000222402 SHMT1P34896 483 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 PAPD7Q5XG87 772 aaKnown RBP16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 RAB21Q9UL25 225 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 ESYT3A0FGR9 886 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 EBAG9O00559 213 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 EPHB6O15197 1021 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 HPDP32754 393 aaPredicted RBP16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 STAT2P52630 851 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 EPHB4P54760 987 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 DDR1Q08345 913 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 MIIPQ5JXC2 388 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 SLC27A3Q5K4L6 730 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 ALKBH5Q6P6C2 394 aaKnown RBP16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 FAM186BQ8IYM0 893 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 MS4A14Q96JA4 679 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 GOLGA6L10A0A0M3HER8 536 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 GFPT2O94808 682 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 ACTN1P12814 892 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 KNOP1Q1ED39 458 aaKnown RBP16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 SLIT2O94813 1529 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 GAKO14976 1311 aa16.38■□□□□ 0.21
UBE2D4-201ENST00000222402 LRRIQ3A6PVS8 624 aaPredicted RBP16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 NDUFB10O96000 172 aa16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 ATP1A2P50993 1020 aa16.37■□□□□ 0.21
UBE2D4-201ENST00000222402 HHIPL2Q6UWX4 724 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms