RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 PSMD2Q13200 908 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 ZCWPW2Q504Y3 356 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 CCNI2Q6ZMN8 369 aaPredicted RBP16.86■□□□□ 0.29
TGFB1-201ENST00000221930 IQCDQ96DY2 449 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 MTMR8Q96EF0 704 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 OSBPL9Q96SU4 736 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 SELENOOQ9BVL4 669 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 ACBD3Q9H3P7 528 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 ZHX3Q9H4I2 956 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 DMGDHQ9UI17 866 aaKnown RBP16.86■□□□□ 0.29
TGFB1-201ENST00000221930 MYO3BQ8WXR4 1341 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 MCM3P25205 808 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 ACTN2P35609 894 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 DNA2P51530 1060 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 HGSNATQ68CP4 663 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 PDXDC1Q6P996 788 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 MYH7BA7E2Y1 1941 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 LCA5LO95447 670 aa16.85■□□□□ 0.29
TGFB1-201ENST00000221930 HERC4Q5GLZ8 1057 aaPredicted RBP16.85■□□□□ 0.29
TGFB1-201ENST00000221930 SPATA4Q8NEY3 305 aa16.85■□□□□ 0.29
TGFB1-201ENST00000221930 ABCB11O95342 1321 aa16.85■□□□□ 0.29
TGFB1-201ENST00000221930 ZNF646O15015 1829 aaPredicted RBP16.85■□□□□ 0.29
TGFB1-201ENST00000221930 TLR2O60603 784 aa16.85■□□□□ 0.29
TGFB1-201ENST00000221930 NOL4O94818 638 aa16.85■□□□□ 0.29
TGFB1-201ENST00000221930 GGCXP38435 758 aa16.85■□□□□ 0.29
TGFB1-201ENST00000221930 POLR2FP61218 127 aaKnown RBP16.85■□□□□ 0.29
TGFB1-201ENST00000221930 TCP10Q12799 353 aa16.85■□□□□ 0.29
TGFB1-201ENST00000221930 ASTE1Q2TB18 679 aaPredicted RBP16.85■□□□□ 0.29
TGFB1-201ENST00000221930 CDC42EP5Q6NZY7 148 aa16.85■□□□□ 0.29
TGFB1-201ENST00000221930 ALS2CR12Q96Q35 445 aa16.85■□□□□ 0.29
TGFB1-201ENST00000221930 ZC3H12CQ9C0D7 883 aaKnown RBP16.85■□□□□ 0.29
TGFB1-201ENST00000221930 LRRC27Q9C0I9 530 aa16.85■□□□□ 0.29
TGFB1-201ENST00000221930 BMP2KQ9NSY1 1161 aaPredicted RBP16.85■□□□□ 0.29
TGFB1-201ENST00000221930 ZC3H4Q9UPT8 1303 aaKnown RBP16.84■□□□□ 0.29
TGFB1-201ENST00000221930 SNAP25P60880 206 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 FAM83BQ5T0W9 1011 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 GPBP1Q86WP2 473 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 MASTLQ96GX5 879 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 MRIQ9BWK5 157 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 VIPAS39Q9H9C1 493 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 PCDHAC2Q9Y5I4 1007 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 PLA2G4BP0C869 781 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
TGFB1-201ENST00000221930 MCTP2Q6DN12 878 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 IQCEQ6IPM2 695 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 PPP1R18Q6NYC8 613 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 RPAINQ86UA6 219 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 MS4A14Q96JA4 679 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 CEP89Q96ST8 783 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 PLCD4Q9BRC7 762 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 LSM14BQ9BX40 385 aaKnown RBP16.84■□□□□ 0.29
TGFB1-201ENST00000221930 PCDHA1Q9Y5I3 950 aa16.84■□□□□ 0.29
TGFB1-201ENST00000221930 POTEFA5A3E0 1075 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 POTEIP0CG38 1075 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 QRICH1Q2TAL8 776 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 DNAJC21Q5F1R6 531 aaKnown RBP16.83■□□□□ 0.29
TGFB1-201ENST00000221930 CCDC181Q5TID7 509 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 STYK1Q6J9G0 422 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 FOXR1Q6PIV2 292 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 POTEGQ6S5H5 508 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 POTEEQ6S8J3 1075 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 LEKR1Q6ZMV7 388 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 SCFD1Q8WVM8 642 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 SGSM3Q96HU1 749 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 KCNQ5Q9NR82 932 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 SWAP70Q9UH65 585 aa16.83■□□□□ 0.29
TGFB1-201ENST00000221930 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.83■□□□□ 0.29
TGFB1-201ENST00000221930 AARSP49588 968 aaKnown RBP eCLIP16.83■□□□□ 0.285e-6■■■■■ 30.6
TGFB1-201ENST00000221930 COL23A1Q86Y22 540 aaPredicted RBP16.83■□□□□ 0.28
TGFB1-201ENST00000221930 FBXO41Q8TF61 875 aa16.83■□□□□ 0.28
TGFB1-201ENST00000221930 TLR10Q9BXR5 811 aa16.83■□□□□ 0.28
TGFB1-201ENST00000221930 NT5C3AQ9H0P0 336 aa16.83■□□□□ 0.28
TGFB1-201ENST00000221930 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.28
TGFB1-201ENST00000221930 PLEKHA4Q9H4M7 779 aa16.83■□□□□ 0.28
TGFB1-201ENST00000221930 POLD4Q9HCU8 107 aa16.83■□□□□ 0.28
TGFB1-201ENST00000221930 PCDHA2Q9Y5H9 948 aa16.83■□□□□ 0.28
TGFB1-201ENST00000221930 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.83■□□□□ 0.28
TGFB1-201ENST00000221930 MED24O75448 989 aa16.83■□□□□ 0.28
TGFB1-201ENST00000221930 KRT18P05783 430 aaKnown RBP16.83■□□□□ 0.28
TGFB1-201ENST00000221930 APOBEC3HQ6NTF7 200 aaKnown RBP16.83■□□□□ 0.28
TGFB1-201ENST00000221930 DNAJC18Q9H819 358 aa16.83■□□□□ 0.28
TGFB1-201ENST00000221930 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
TGFB1-201ENST00000221930 AGPSO00116 658 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 MEIS1O00470 390 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 TAL1P17542 331 aaPredicted RBP16.82■□□□□ 0.28
TGFB1-201ENST00000221930 CYP11B2P19099 503 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 SLC9C1Q4G0N8 1177 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 SFMBT2Q5VUG0 894 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 EMILIN3Q9NT22 766 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 HYOU1Q9Y4L1 999 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 PSME4Q14997 1843 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 PPP1R12AO14974 1030 aaPredicted RBP16.82■□□□□ 0.28
TGFB1-201ENST00000221930 PRPF6O94906 941 aaKnown RBP16.82■□□□□ 0.28
TGFB1-201ENST00000221930 HLA-DOAP06340 250 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 CASP5P51878 434 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 PSMC6P62333 389 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 ADAM9Q13443 819 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 KLHDC7AQ5VTJ3 777 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 CCDC70Q6NSX1 233 aa16.82■□□□□ 0.28
TGFB1-201ENST00000221930 CCDC65Q8IXS2 484 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms