RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 MIER3Q7Z3K6 550 aa30.68■■■□□ 2.5
CHMP4B-201ENST00000217402 ARMC5Q96C12 935 aa30.68■■■□□ 2.5
CHMP4B-201ENST00000217402 GBP4Q96PP9 640 aa30.68■■■□□ 2.5
CHMP4B-201ENST00000217402 RAB34Q9BZG1 259 aa30.68■■■□□ 2.5
CHMP4B-201ENST00000217402 RNF208Q9H0X6 261 aa30.68■■■□□ 2.5
CHMP4B-201ENST00000217402 XPNPEP3Q9NQH7 507 aa30.68■■■□□ 2.5
CHMP4B-201ENST00000217402 SYNRGQ9UMZ2 1314 aa30.68■■■□□ 2.5
CHMP4B-201ENST00000217402 PP2D1A8MPX8 630 aa30.67■■■□□ 2.5
CHMP4B-201ENST00000217402 PGK1P00558 417 aa30.67■■■□□ 2.5
CHMP4B-201ENST00000217402 SPECC1Q5M775 1068 aa30.67■■■□□ 2.5
CHMP4B-201ENST00000217402 CLEC17AQ6ZS10 378 aa30.67■■■□□ 2.5
CHMP4B-201ENST00000217402 IGSF22Q8N9C0 903 aa30.67■■■□□ 2.5
CHMP4B-201ENST00000217402 LRWD1Q9UFC0 647 aa30.67■■■□□ 2.5
CHMP4B-201ENST00000217402 Q9Y3F1 56 aa30.67■■■□□ 2.5
CHMP4B-201ENST00000217402 MSCO60682 206 aa30.66■■■□□ 2.5
CHMP4B-201ENST00000217402 PPTC7Q8NI37 304 aa30.66■■■□□ 2.5
CHMP4B-201ENST00000217402 GPR20Q99678 358 aa30.66■■■□□ 2.5
CHMP4B-201ENST00000217402 DISC1Q9NRI5 854 aa30.66■■■□□ 2.5
CHMP4B-201ENST00000217402 WDR64B1ANS9 1081 aa30.65■■■□□ 2.5
CHMP4B-201ENST00000217402 MYCNP04198 464 aaPredicted RBP30.65■■■□□ 2.5
CHMP4B-201ENST00000217402 C6orf222P0C671 652 aaPredicted RBP30.65■■■□□ 2.5
CHMP4B-201ENST00000217402 CDC25AP30304 524 aa30.65■■■□□ 2.5
CHMP4B-201ENST00000217402 JAK3P52333 1124 aa30.65■■■□□ 2.5
CHMP4B-201ENST00000217402 SMAP1Q8IYB5 467 aaPredicted RBP30.65■■■□□ 2.5
CHMP4B-201ENST00000217402 CUTAO60888 179 aa30.65■■■□□ 2.5
CHMP4B-201ENST00000217402 LONP1P36776 959 aaKnown RBP30.65■■■□□ 2.5
CHMP4B-201ENST00000217402 BEX3Q00994 111 aa30.65■■■□□ 2.5
CHMP4B-201ENST00000217402 PAK6Q9NQU5 681 aaPredicted RBP30.65■■■□□ 2.5
CHMP4B-201ENST00000217402 GSTTP1A0A1W2PQM5 241 aa30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 MYADML2A6NDP7 307 aa30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 SFNP31947 248 aa30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 GJA9P57773 515 aa30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 PDIA5Q14554 519 aa30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 CSPP1Q1MSJ5 1256 aa30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 AXDND1Q5T1B0 1012 aaPredicted RBP30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 LHX8Q68G74 356 aa30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 DEFB118Q96PH6 123 aa30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 SPC25Q9HBM1 224 aa30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 PCDHA10Q9Y5I2 948 aa30.64■■■□□ 2.5
CHMP4B-201ENST00000217402 MMP3P08254 477 aa30.63■■■□□ 2.49
CHMP4B-201ENST00000217402 TCF7P36402 384 aaPredicted RBP30.63■■■□□ 2.49
CHMP4B-201ENST00000217402 FSCN1Q16658 493 aaKnown RBP30.63■■■□□ 2.49
CHMP4B-201ENST00000217402 MIS18BP1Q6P0N0 1132 aa30.63■■■□□ 2.49
CHMP4B-201ENST00000217402 SEPT1Q8WYJ6 367 aa30.63■■■□□ 2.49
CHMP4B-201ENST00000217402 UPF3AQ9H1J1 476 aaKnown RBP30.63■■■□□ 2.49
CHMP4B-201ENST00000217402 SUPT20HL2P0C7V6 817 aa30.62■■■□□ 2.49
CHMP4B-201ENST00000217402 CPT1AP50416 773 aa30.62■■■□□ 2.49
CHMP4B-201ENST00000217402 ABHD15Q6UXT9 468 aa30.62■■■□□ 2.49
CHMP4B-201ENST00000217402 CTAGE5O15320 804 aa30.62■■■□□ 2.49
CHMP4B-201ENST00000217402 ADAMTS4O75173 837 aa30.62■■■□□ 2.49
CHMP4B-201ENST00000217402 PSAPP07602 524 aa30.62■■■□□ 2.49
CHMP4B-201ENST00000217402 UTP14CQ5TAP6 766 aaKnown RBP30.62■■■□□ 2.49
CHMP4B-201ENST00000217402 USP49Q70CQ1 688 aa30.62■■■□□ 2.49
CHMP4B-201ENST00000217402 AK8Q96MA6 479 aa30.62■■■□□ 2.49
CHMP4B-201ENST00000217402 EIF2AK1Q9BQI3 630 aaKnown RBP30.62■■■□□ 2.49
CHMP4B-201ENST00000217402 A6NJR5 290 aa30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 BACH1O14867 736 aa30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 ATG7O95352 703 aa30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 CYP4A11Q02928 519 aa30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 EPHA7Q15375 998 aa30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 BRDTQ58F21 947 aaPredicted RBP30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 BANK1Q8NDB2 785 aa30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 RDM1Q8NG50 284 aa30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 ERMNQ8TAM6 284 aa30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 SNX29Q8TEQ0 813 aa30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 SYMPKQ92797 1274 aaKnown RBP30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 EPSTI1Q96J88 318 aa30.61■■■□□ 2.49
CHMP4B-201ENST00000217402 GNASQ5JWF2 1037 aa30.6■■■□□ 2.49
CHMP4B-201ENST00000217402 SWSAP1Q6NVH7 229 aa30.6■■■□□ 2.49
CHMP4B-201ENST00000217402 SHC4Q6S5L8 630 aa30.6■■■□□ 2.49
CHMP4B-201ENST00000217402 TRIM50Q86XT4 487 aa30.6■■■□□ 2.49
CHMP4B-201ENST00000217402 CCDC60Q8IWA6 550 aaPredicted RBP30.6■■■□□ 2.49
CHMP4B-201ENST00000217402 ZNF579Q8NAF0 562 aaKnown RBP30.6■■■□□ 2.49
CHMP4B-201ENST00000217402 TMEM87AQ8NBN3 555 aa30.6■■■□□ 2.49
CHMP4B-201ENST00000217402 DYDC2Q96IM9 177 aa30.6■■■□□ 2.49
CHMP4B-201ENST00000217402 RGL1Q9NZL6 768 aa30.6■■■□□ 2.49
CHMP4B-201ENST00000217402 ZNF286BP0CG31 522 aa30.59■■■□□ 2.49
CHMP4B-201ENST00000217402 ZRSR1Q15695 479 aaKnown RBP30.59■■■□□ 2.49
CHMP4B-201ENST00000217402 DGKDQ16760 1214 aa30.59■■■□□ 2.49
CHMP4B-201ENST00000217402 KRT79Q5XKE5 535 aa30.59■■■□□ 2.49
CHMP4B-201ENST00000217402 ADALQ6DHV7 355 aa30.59■■■□□ 2.49
CHMP4B-201ENST00000217402 GABBR1Q9UBS5 961 aa30.59■■■□□ 2.49
CHMP4B-201ENST00000217402 FRMPD3Q5JV73 1810 aa30.59■■■□□ 2.49
CHMP4B-201ENST00000217402 GOLGA6L4A6NEF3 574 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 PRPF40AO75400 957 aaKnown RBP30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 CCT6AP40227 531 aaKnown RBP30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 UBA7P41226 1012 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 UGCGQ16739 394 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 HAUS3Q68CZ6 603 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 PCYT2Q99447 389 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 MMTAG2Q9BU76 263 aaKnown RBP30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 PPFIA4O75335 1185 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 LGALS2P05162 132 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 MYL3P08590 195 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 CTTNQ14247 550 aaKnown RBP30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 RNF180Q86T96 592 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 CABP7Q86V35 215 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 AZI2Q9H6S1 392 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 ZNF302Q9NR11 478 aa30.58■■■□□ 2.49
CHMP4B-201ENST00000217402 BRCA2P51587 3418 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms