RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 AJUBAQ96IF1 538 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 WDR33Q9C0J8 1336 aaKnown RBP4.59□□□□□ -1.67
CDKN3-201ENST00000216414 SLC6A20Q9NP91 592 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 HSPBP1Q9NZL4 362 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 ARHGAP20Q9P2F6 1191 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 INPP5FQ9Y2H2 1132 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 MRVI1Q9Y6F6 885 aa4.59□□□□□ -1.67
CDKN3-201ENST00000216414 ZNF202O95125 648 aa4.58□□□□□ -1.68
CDKN3-201ENST00000216414 LTFP02788 710 aa4.58□□□□□ -1.68
CDKN3-201ENST00000216414 ABHD18Q0P651 414 aa4.58□□□□□ -1.68
CDKN3-201ENST00000216414 MIIPQ5JXC2 388 aa4.58□□□□□ -1.68
CDKN3-201ENST00000216414 ZNF575Q86XF7 245 aa4.58□□□□□ -1.68
CDKN3-201ENST00000216414 C1orf159Q96HA4 380 aa4.58□□□□□ -1.68
CDKN3-201ENST00000216414 ACBD3Q9H3P7 528 aa4.58□□□□□ -1.68
CDKN3-201ENST00000216414 PPARGC1AQ9UBK2 798 aaKnown RBP4.58□□□□□ -1.68
CDKN3-201ENST00000216414 H0Y858 1186 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 MSCO60682 206 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 CHGBP05060 677 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 ZNF888P0CJ79 500 aaPredicted RBP4.57□□□□□ -1.68
CDKN3-201ENST00000216414 FAHP16930 419 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 COMTP21964 271 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 VAMP1P23763 118 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 TUSC3Q13454 348 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 USP10Q14694 798 aaKnown RBP4.57□□□□□ -1.68
CDKN3-201ENST00000216414 PAN2Q504Q3 1202 aaKnown RBP4.57□□□□□ -1.68
CDKN3-201ENST00000216414 SLC35F1Q5T1Q4 408 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 USP53Q70EK8 1073 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 FUKQ8N0W3 1084 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 KCTD13Q8WZ19 329 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 ZNF503Q96F45 646 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 NEIL1Q96FI4 390 aaPredicted RBP4.57□□□□□ -1.68
CDKN3-201ENST00000216414 CDIP1Q9H305 208 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 KCND1Q9NSA2 647 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 PTPN22Q9Y2R2 807 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 NPFFR2Q9Y5X5 522 aa4.57□□□□□ -1.68
CDKN3-201ENST00000216414 ENO2P09104 434 aaPredicted RBP4.56□□□□□ -1.68
CDKN3-201ENST00000216414 COL6A2P12110 1019 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 GRIA2P42262 883 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 RAC3P60763 192 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 PFKPQ01813 784 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 PTH1RQ03431 593 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 LSM12Q3MHD2 195 aaKnown RBP4.56□□□□□ -1.68
CDKN3-201ENST00000216414 TNNI3KQ59H18 835 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 AGBL4Q5VU57 503 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 IGFL4Q6B9Z1 124 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 MRM1Q6IN84 353 aaKnown RBP4.56□□□□□ -1.68
CDKN3-201ENST00000216414 OTOP3Q7RTS5 596 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 REXO1L1PQ8IX06 675 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 EXTL1Q92935 676 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 CHFRQ96EP1 664 aa4.56□□□□□ -1.68
CDKN3-201ENST00000216414 TACO1Q9BSH4 297 aaKnown RBP4.56□□□□□ -1.68
CDKN3-201ENST00000216414 AGRPO00253 132 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 SSBP05455 408 aaKnown RBP eCLIP4.55□□□□□ -1.68
CDKN3-201ENST00000216414 GNAT1P11488 350 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 MCM7P33993 719 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 RRADP55042 308 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 DGCR2P98153 550 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 CD276Q5ZPR3 534 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 EDAQ92838 391 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 KCNJ15Q99712 375 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 IER2Q9BTL4 223 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 PHF20Q9BVI0 1012 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 CARD11Q9BXL7 1154 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 TGIF2Q9GZN2 237 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 KATNBL1Q9H079 304 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 CCSER2Q9H7U1 834 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 GPR27Q9NS67 375 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 NUB1Q9Y5A7 615 aa4.55□□□□□ -1.68
CDKN3-201ENST00000216414 IL18BPO95998 194 aa4.54□□□□□ -1.68
CDKN3-201ENST00000216414 ATF4P18848 351 aaPredicted RBP4.54□□□□□ -1.68
CDKN3-201ENST00000216414 ACO1P21399 889 aaKnown RBP4.54□□□□□ -1.68
CDKN3-201ENST00000216414 GRK2P25098 689 aa4.54□□□□□ -1.68
CDKN3-201ENST00000216414 GRK3P35626 688 aa4.54□□□□□ -1.68
CDKN3-201ENST00000216414 PPP2R2AP63151 447 aa4.54□□□□□ -1.68
CDKN3-201ENST00000216414 SPIRE1Q08AE8 756 aa4.54□□□□□ -1.68
CDKN3-201ENST00000216414 MAP4K2Q12851 820 aa4.54□□□□□ -1.68
CDKN3-201ENST00000216414 FXNQ16595 210 aa4.54□□□□□ -1.68
CDKN3-201ENST00000216414 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.54□□□□□ -1.68
CDKN3-201ENST00000216414 C1orf210Q8IVY1 113 aa4.54□□□□□ -1.68
CDKN3-201ENST00000216414 UHMK1Q8TAS1 419 aaKnown RBP4.54□□□□□ -1.68
CDKN3-201ENST00000216414 MICAL1Q8TDZ2 1067 aa4.54□□□□□ -1.68
CDKN3-201ENST00000216414 OR14A2Q96R54 314 aa4.54□□□□□ -1.68
CDKN3-201ENST00000216414 ZNF839A8K0R7 811 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 NKRFO15226 690 aaKnown RBP eCLIP4.53□□□□□ -1.68
CDKN3-201ENST00000216414 NARSO43776 548 aaKnown RBP4.53□□□□□ -1.68
CDKN3-201ENST00000216414 CDC14BO60729 498 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 PPFIA2O75334 1257 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 RAD17O75943 681 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 MFAP1P55081 439 aaKnown RBP4.53□□□□□ -1.68
CDKN3-201ENST00000216414 RNF151Q2KHN1 245 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 EEPD1Q7L9B9 569 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 POLNQ7Z5Q5 900 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 NEU4Q8WWR8 484 aaPredicted RBP4.53□□□□□ -1.68
CDKN3-201ENST00000216414 CEP89Q96ST8 783 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 DPYSL5Q9BPU6 564 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 TRIM8Q9BZR9 551 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 DSEQ9UL01 958 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 OAZ3Q9UMX2 235 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 TELO2Q9Y4R8 837 aa4.53□□□□□ -1.68
CDKN3-201ENST00000216414 ESYT3A0FGR9 886 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms