RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TOB2Q14106 344 aaPredicted RBP14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 BBS9Q3SYG4 887 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 GABPB2Q8TAK5 448 aaPredicted RBP14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 AMNQ9BXJ7 453 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 UBN1Q9NPG3 1134 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 PLAAQ9Y263 795 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 NUB1Q9Y5A7 615 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 RFX1P22670 979 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 PDCLQ13371 301 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 CASP8Q14790 479 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 TBC1D1Q86TI0 1168 aaPredicted RBP14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 CCDC68Q9H2F9 335 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 STAP2Q9UGK3 403 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 SUN1O94901 812 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 PEX3P56589 373 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 PPP1R36Q96LQ0 422 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 RPS6KC1Q96S38 1066 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 ELAC2Q9BQ52 826 aaKnown RBP14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 TRIM4Q9C037 500 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 SUSD4Q5VX71 490 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 GNL1P36915 607 aaPredicted RBP14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 MAN2A1Q16706 1144 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 ZNF746Q6NUN9 644 aaPredicted RBP14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 PPP4R4Q6NUP7 873 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 MB21D1Q8N884 522 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 DCPSQ96C86 337 aaKnown RBP14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 ZCCHC17Q9NP64 241 aaKnown RBP14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 N4BP1O75113 896 aaKnown RBP14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 POLE2P56282 527 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 CDC37Q16543 378 aaPredicted RBP14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 SMYD3Q9H7B4 428 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 PPP1R9AQ9ULJ8 1098 aa14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
TGFBR3-201ENST00000212355 CCDC144BQ3MJ40 725 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 RSRC2Q7L4I2 434 aaKnown RBP14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 CROCCP2Q86T23 111 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 PDCD7Q8N8D1 485 aaKnown RBP14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 GSDMAQ96QA5 445 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 RWDD2AQ9UIY3 292 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 KIF24Q5T7B8 1368 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 PGRMC1O00264 195 aaKnown RBP14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 GNGT2O14610 69 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 EPHB4P54760 987 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 DR1Q01658 176 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 PHLDB3Q6NSJ2 640 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 FAM47EQ6ZV65 393 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 RPAINQ86UA6 219 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 MCF2L2Q86YR7 1114 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 ACCSQ96QU6 501 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 ABCA5Q8WWZ7 1642 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 KRT3P12035 628 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 SLMAPQ14BN4 828 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 TMTC3Q6ZXV5 915 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 HPS3Q969F9 1004 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 MED4Q9NPJ6 270 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 COPRSQ9NQ92 184 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 ANGPTL3Q9Y5C1 460 aa14.71□□□□□ -0.05
TGFBR3-201ENST00000212355 A0A1W2PQ27 194 aa14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 A0A1W2PQ64 194 aa14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 A0A1W2PQD8 194 aa14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 GPC4O75487 556 aa14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 FGGP02679 453 aa14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 STAT2P52630 851 aa14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 SYDE2Q5VT97 1194 aa14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 FAF1Q9UNN5 650 aaPredicted RBP14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 NPHP3-ACAD11A0A0J9YXS1 232 aa14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 HNRNPH2P55795 449 aaKnown RBP14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 SNX25Q9H3E2 840 aa14.71□□□□□ -0.06
TGFBR3-201ENST00000212355 IWS1Q96ST2 819 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 ABCC12Q96J65 1359 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 PHLPP2Q6ZVD8 1323 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 SERPINB2P05120 415 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 GARSP41250 739 aaKnown RBP14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 SPOPLQ6IQ16 392 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 DNAJC24Q6P3W2 148 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 TSPYL2Q9H2G4 693 aaPredicted RBP14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 NRBP2Q9NSY0 501 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 SNX24Q9Y343 169 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 A0A0G2JND7 137 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 EXOC1LA0A1B0GW35 172 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 CDK8P49336 464 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 PRPSAP1Q14558 356 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 LRRC14Q15048 493 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 RWDD4Q6NW29 188 aaKnown RBP14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 NLRP10Q86W26 655 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 RNF26Q9BY78 433 aaPredicted RBP14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 BHMT2Q9H2M3 363 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 XDHP47989 1333 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 SYNDIG1LA6NDD5 238 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 NSUN2Q08J23 767 aaKnown RBP eCLIP14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 NFRKBQ6P4R8 1299 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 RNF207Q6ZRF8 634 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 ARHGEF18Q6ZSZ5 1173 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 ZCWPW1Q9H0M4 648 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 A6NNZ2 444 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 SLFN14P0C7P3 912 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 ARHGAP4P98171 946 aa14.7□□□□□ -0.06
TGFBR3-201ENST00000212355 TUBB8Q3ZCM7 444 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms