RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 PCDHA8Q9Y5H6 950 aa25.11■■□□□ 1.61
TARBP1-201ENST00000040877 USP17L5A8MUK1 530 aa25.11■■□□□ 1.61
TARBP1-201ENST00000040877 DNAJC24Q6P3W2 148 aa25.11■■□□□ 1.61
TARBP1-201ENST00000040877 SP8Q8IXZ3 490 aa25.11■■□□□ 1.61
TARBP1-201ENST00000040877 SEPT10Q9P0V9 454 aa25.11■■□□□ 1.61
TARBP1-201ENST00000040877 HOXA13P31271 388 aaPredicted RBP25.1■■□□□ 1.61
TARBP1-201ENST00000040877 CHAMP1Q96JM3 812 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 GDAP1L1Q96MZ0 367 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 SLC12A6Q9UHW9 1150 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 GRM4Q14833 912 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 KAZNQ674X7 775 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 LMNTD2Q8IXW0 634 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 SPZ1Q9BXG8 430 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 TSNAXIP1Q2TAA8 658 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 MB21D2Q8IYB1 491 aaPredicted RBP25.1■■□□□ 1.61
TARBP1-201ENST00000040877 KIAA1586Q9HCI6 787 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 NEDD4P46934 1319 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 GUCY2DQ02846 1103 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 MAP3K21Q5TCX8 1036 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 GAS2L3Q86XJ1 694 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 APOBEC3FQ8IUX4 373 aaKnown RBP25.1■■□□□ 1.61
TARBP1-201ENST00000040877 PLA2G12BQ9BX93 195 aa25.1■■□□□ 1.61
TARBP1-201ENST00000040877 UBE2TQ9NPD8 197 aaPredicted RBP25.1■■□□□ 1.61
TARBP1-201ENST00000040877 SEMA3FQ13275 785 aa25.09■■□□□ 1.61
TARBP1-201ENST00000040877 RPS6KA2Q15349 733 aa25.09■■□□□ 1.61
TARBP1-201ENST00000040877 STXBP2Q15833 593 aa25.09■■□□□ 1.61
TARBP1-201ENST00000040877 ARMCX2Q7L311 632 aa25.09■■□□□ 1.61
TARBP1-201ENST00000040877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.09■■□□□ 1.61
TARBP1-201ENST00000040877 ALDH8A1Q9H2A2 487 aaPredicted RBP25.09■■□□□ 1.61
TARBP1-201ENST00000040877 PLEKHA4Q9H4M7 779 aa25.09■■□□□ 1.61
TARBP1-201ENST00000040877 RPF1Q9H9Y2 349 aaKnown RBP25.09■■□□□ 1.61
TARBP1-201ENST00000040877 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.09■■□□□ 1.61
TARBP1-201ENST00000040877 KRT76Q01546 638 aa25.09■■□□□ 1.61
TARBP1-201ENST00000040877 DAAM1Q9Y4D1 1078 aa25.09■■□□□ 1.61
TARBP1-201ENST00000040877 LMTK2Q8IWU2 1503 aa25.09■■□□□ 1.61
TARBP1-201ENST00000040877 PNPLA7Q6ZV29 1317 aa25.09■■□□□ 1.61
TARBP1-201ENST00000040877 PROM2Q8N271 834 aa25.09■■□□□ 1.61
TARBP1-201ENST00000040877 FAM71BQ8TC56 605 aa25.08■■□□□ 1.61
TARBP1-201ENST00000040877 SAMSN1Q9NSI8 373 aaKnown RBP25.08■■□□□ 1.61
TARBP1-201ENST00000040877 ATP8B1O43520 1251 aa25.08■■□□□ 1.61
TARBP1-201ENST00000040877 LRRN2O75325 713 aa25.08■■□□□ 1.61
TARBP1-201ENST00000040877 CYP2D6P10635 497 aa25.08■■□□□ 1.61
TARBP1-201ENST00000040877 ARL4AP40617 200 aa25.08■■□□□ 1.61
TARBP1-201ENST00000040877 ADAT2Q7Z6V5 191 aaKnown RBP25.08■■□□□ 1.61
TARBP1-201ENST00000040877 WDR64B1ANS9 1081 aa25.08■■□□□ 1.61
TARBP1-201ENST00000040877 ENAHQ8N8S7 591 aaPredicted RBP25.08■■□□□ 1.61
TARBP1-201ENST00000040877 FAM133AQ8N9E0 248 aa25.08■■□□□ 1.61
TARBP1-201ENST00000040877 MGARPQ8TDB4 240 aa25.08■■□□□ 1.61
TARBP1-201ENST00000040877 ZSCAN26Q16670 478 aa25.08■■□□□ 1.6
TARBP1-201ENST00000040877 PTPROQ16827 1216 aa25.08■■□□□ 1.6
TARBP1-201ENST00000040877 TDRD3Q9H7E2 651 aaKnown RBP25.08■■□□□ 1.6
TARBP1-201ENST00000040877 CACYBPQ9HB71 228 aaKnown RBP25.08■■□□□ 1.6
TARBP1-201ENST00000040877 PVALEFA0A1B0GWK0 134 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 ORC4O43929 436 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 PRELPP51888 382 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 TCP11X2Q5H9J9 407 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 GJD4Q96KN9 370 aaPredicted RBP25.07■■□□□ 1.6
TARBP1-201ENST00000040877 GFPT2O94808 682 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 RNASELQ05823 741 aaKnown RBP25.07■■□□□ 1.6
TARBP1-201ENST00000040877 MTMR1Q13613 665 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 CTTNQ14247 550 aaKnown RBP25.07■■□□□ 1.6
TARBP1-201ENST00000040877 LRRC4Q9HBW1 653 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 MSTO1Q9BUK6 570 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 SLC38A10Q9HBR0 1119 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 ZWINTO95229 277 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 ARHGAP4P98171 946 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 PHLDB2Q86SQ0 1253 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 NSUN6Q8TEA1 469 aaKnown RBP25.07■■□□□ 1.6
TARBP1-201ENST00000040877 RMDN3Q96TC7 470 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 MAD1L1Q9Y6D9 718 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 MADDQ8WXG6 1647 aa25.07■■□□□ 1.6
TARBP1-201ENST00000040877 MCF2LO15068 1137 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 COBLO75128 1261 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 FAM83BQ5T0W9 1011 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 GNGT1P63211 74 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 RABL6Q3YEC7 729 aaPredicted RBP25.06■■□□□ 1.6
TARBP1-201ENST00000040877 TTBK2Q6IQ55 1244 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 C2orf69Q8N8R5 385 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 NUF2Q9BZD4 464 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 JCADQ9P266 1359 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 DDIT3P35638 169 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 EPHB4P54760 987 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 YWHAGP61981 247 aaKnown RBP eCLIP25.06■■□□□ 1.6
TARBP1-201ENST00000040877 ATP6V0A4Q9HBG4 840 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 LY9Q9HBG7 655 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 NXF1Q9UBU9 619 aaKnown RBP25.06■■□□□ 1.6
TARBP1-201ENST00000040877 HERC5Q9UII4 1024 aaKnown RBP25.06■■□□□ 1.6
TARBP1-201ENST00000040877 SGK1O00141 431 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 EEPD1Q7L9B9 569 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 PYCARDQ9ULZ3 195 aa25.06■■□□□ 1.6
TARBP1-201ENST00000040877 ECEL1O95672 775 aa25.05■■□□□ 1.6
TARBP1-201ENST00000040877 SFNP31947 248 aa25.05■■□□□ 1.6
TARBP1-201ENST00000040877 PCK1P35558 622 aa25.05■■□□□ 1.6
TARBP1-201ENST00000040877 COPB2P35606 906 aa25.05■■□□□ 1.6
TARBP1-201ENST00000040877 SGO2Q562F6 1265 aa25.05■■□□□ 1.6
TARBP1-201ENST00000040877 NHEJ1Q9H9Q4 299 aaPredicted RBP25.05■■□□□ 1.6
TARBP1-201ENST00000040877 USP17L10C9JJH3 530 aa25.05■■□□□ 1.6
TARBP1-201ENST00000040877 EIF4A3P38919 411 aaKnown RBP25.05■■□□□ 1.6
TARBP1-201ENST00000040877 PNMA8AQ86V59 439 aaPredicted RBP25.05■■□□□ 1.6
TARBP1-201ENST00000040877 QRICH2Q9H0J4 1663 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms