RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Ppp1r3aQ99MR9 1089 aa11.21□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ribc1Q9D0B8 379 aa11.21□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Cmtm5Q9D6G9 156 aa11.21□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Extl2Q9ES89 330 aa11.21□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 BcamQ9R069 622 aa11.21□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Sbf2E9PXF8 1872 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Myh11O08638 1972 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Spocd1B1ASB6 936 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Cetn3O35648 167 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Stat4P42228 749 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Actn4P57780 912 aaKnown RBP11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Senp1P59110 640 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tubb5P99024 444 aaKnown RBP11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Top1Q04750 767 aaKnown RBP11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Pls1Q3V0K9 630 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 March6Q6ZQ89 909 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Brd2Q7JJ13 798 aaKnown RBP11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gpr180Q8BPS4 441 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Zswim4Q8C7B8 1101 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Vcpip1Q8CDG3 1220 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Acat1Q8QZT1 424 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Cd248Q91V98 765 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Hdac9Q99N13 588 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 ToporslQ9D2F8 683 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Trp53inp1Q9QXE4 239 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 IkQ9Z1M8 557 aaKnown RBP11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Kmt2eQ3UG20 1868 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 PatjQ63ZW7 1834 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 JcadQ5DTX6 1320 aa11.2□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Clrn2B2RVW2 232 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ace3D0G895 737 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Cfap70D3YVL2 1141 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 ErmardE9Q048 622 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Kcnh2O35219 1162 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Pgrmc1O55022 195 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tph1P17532 447 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Nr2f2P43135 414 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Prr7Q3V0I2 269 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Scarf1Q5ND28 820 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Rgl1Q60695 768 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 GartQ64737 1010 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Eif3j2Q66JS6 263 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Lrrc1Q80VQ1 524 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tmem39bQ810L4 492 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Rab11fip4Q8BQP8 635 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Q8C1R3 189 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Efcab8Q8C9R9 203 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Epc1Q8C9X6 813 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 CnstQ8CBC4 711 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Adcy3Q8VHH7 1145 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Prpf6Q91YR7 941 aaKnown RBP11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ubxn6Q99PL6 442 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ccdc43Q9CR29 222 aaKnown RBP11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 GrapQ9CX99 217 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Lrrc57Q9D1G5 239 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Mxra8Q9DBV4 442 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Prpf40aQ9R1C7 953 aaKnown RBP11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Eif2ak3Q9Z2B5 1114 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gm3409A0A0G2JE67 319 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Foxn2E9Q7L6 429 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ankrd35E9Q9D8 996 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Fgfr2P21803 821 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Mcm5P49718 733 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Pafah1b1P63005 410 aaKnown RBP11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 GabpaQ00422 454 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Dhx37Q6NZL1 1150 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 BcrQ6PAJ1 1270 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gprc5cQ8K3J9 440 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Kdm4bQ91VY5 1086 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Snapc2Q91XA5 359 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Erp44Q9D1Q6 406 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Myl7Q9QVP4 175 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ddx25Q9QY15 484 aa11.19□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Lrrc38A2VDH3 298 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Enc1O35709 589 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tp53P02340 387 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Serpina1aP07758 413 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Serpina1bP22599 413 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Hps5P59438 1126 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Kifap3P70188 793 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Serpina1cQ00896 412 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Serpina1dQ00897 413 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Zc3h18Q0P678 948 aaKnown RBP11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Atp8b1Q148W0 1251 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 YdjcQ14BV6 310 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Pbxip1Q3TVI8 727 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Brd9Q3UQU0 596 aaKnown RBP11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Sh3gl1Q62419 368 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Stxbp2Q64324 593 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Slc17a8Q8BFU8 601 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Fbxo28Q8BIG4 368 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Ccdc113Q8C5T8 377 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Dact1Q8R4A3 778 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Tdrd3Q91W18 743 aaKnown RBP11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Slc25a38Q91XD8 326 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Gbp7Q91Z40 638 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Pstpip2Q99M15 334 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 1700020D05RikQ99PB1 294 aa11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Smc1aQ9CU62 1233 aaKnown RBP11.18□□□□□ -0.62
Cpsf3-211ENSMUST00000222968 Lrp2bpQ9D4C6 346 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms