RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Col4a5Q63ZW6 1691 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Myh7bA2AQP0 1941 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Serpinc1P32261 465 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 ItpripQ3TNL8 555 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Haus4Q8BFT2 363 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Nemp2Q8CB65 421 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Grin3bQ91ZU9 1003 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Tmem192Q9CXT7 266 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Cfap53Q9D439 514 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 BcamQ9R069 622 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Usp31E9Q6Y8 1344 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Gm28042B7ZCM9 1014 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Ap1b1O35643 943 aaKnown RBP10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 RaraP11416 462 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 ArP19091 899 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Gas8Q60779 478 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Ccpg1Q640L3 753 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Dcaf15Q6PFH3 600 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Sh3d21Q7TSG5 549 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Cyp26b1Q811W2 512 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 D130040H23RikQ8BII3 405 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Rab11fip4Q8BQP8 635 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Spata32Q8C5V0 334 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 FktnQ8R507 461 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Ascc2Q91WR3 749 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 F11Q91Y47 624 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Ercc4Q9QZD4 917 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Lypla2Q9WTL7 231 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Ripor3A1L3T7 938 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Apol6B7ZC55 329 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Chp1P61022 195 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 NfibP97863 570 aaKnown RBP10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Tmem35bQ3U0Y2 150 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Gjd4Q8BSD4 364 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Cog5Q8C0L8 829 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Serpinb13Q8CDC0 389 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Aldh1b1Q9CZS1 519 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Add1Q9QYC0 735 aaKnown RBP10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 StrcQ8VIM6 1809 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Krt36B1AQ75 473 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Fam183bQ5NC57 135 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Drd5Q8BLD9 478 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Ttc26Q8BS45 554 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Pwp2Q8BU03 919 aaKnown RBP10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Tbc1d10cQ8C9V1 444 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Slc25a38Q91XD8 326 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Ribc1Q9D0B8 379 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Arhgef7Q9ES28 862 aa10.51□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Ppp1r9aH3BJD6 1292 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Serpina1aP07758 413 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Serpina1bP22599 413 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Serpina1cQ00896 412 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Serpina1dQ00897 413 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Lmntd2Q0VET5 664 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Dnph1Q80VJ3 173 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Nop9Q8BMC4 636 aaKnown RBP10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Trim47Q8C0E3 641 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 NapgQ9CWZ7 312 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Psma7Q9Z2U0 248 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Gm45194A0A140LJG2 572 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 DohhA0A1Y7VJ29 135 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Ttc38A3KMP2 465 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Pik3r1P26450 724 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Rit2P70425 217 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Nlrp4cQ3TKR3 982 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Vmn1r199Q8R280 367 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Cmtr1Q9DBC3 837 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Gm45208A0A140LJ36 292 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 AurkbO70126 345 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Cst8P32766 142 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 LeprP48356 1162 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Cep126Q0VBV7 1103 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 YdjcQ14BV6 310 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Mrps31Q61733 384 aaKnown RBP10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Tbc1d22bQ80VE5 505 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Usp33Q8R5K2 909 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Med24Q99K74 987 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Cd2bp2Q9CWK3 342 aaKnown RBP10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Tube1Q9D6T1 475 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Kcnh7Q9ER47 1195 aa10.5□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Zfp984A2A7A2 547 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Map4k1P70218 827 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Gpr162Q3UN16 588 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 PodnQ7TQ62 611 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Bbs7Q8K2G4 715 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Dqx1Q924H9 718 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 PpihQ9D868 188 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 ChmQ9QXG2 665 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 PfasQ5SUR0 1337 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Magea10A2AMW4 325 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Orc4O88708 433 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Hps5P59438 1126 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Rps6P62754 249 aaKnown RBP10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Siah1bQ06985 282 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 SlmapQ3URD3 845 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Vwa3aQ3UVV9 1148 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Znf827Q505G8 1078 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Snd1Q78PY7 910 aaKnown RBP10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Hgh1Q8C3I8 393 aa10.49□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Scyl2Q8CFE4 930 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms