RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Rps6ka1P18653 724 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Lrrc36Q3V0M2 755 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Meis1Q60954 390 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Anks6Q6GQX6 883 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Arhgap33Q80YF9 1305 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Rassf10Q8BL43 508 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 OplahQ8K010 1288 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Kiaa1024Q8K3V7 917 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Pcdhb5Q91XZ5 792 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Dph6Q9CQ28 267 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Luc7lQ9CYI4 371 aaKnown RBP12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 NapaQ9DB05 295 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 FignQ9ERZ6 759 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Sept3Q9Z1S5 350 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Klrc1Q9Z202 244 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Scgb2b12S4R2L0 112 aa12.69□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Fgd3O88842 733 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Eps15P42567 897 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Eef2P58252 858 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Spout1Q3UHX9 385 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gm5169Q5M8P2 212 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Haus6Q6NV99 933 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Wdr44Q6NVE8 915 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Skor1Q8BX46 964 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Mettl13Q91YR5 698 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Kif17Q99PW8 1038 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Erp44Q9D1Q6 406 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Add1Q9QYC0 735 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Tex21Q9R0U9 575 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 AdnpQ9Z103 1108 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Cpsf2O35218 782 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Sema3fO88632 785 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 LdhaP06151 332 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Tnnc1P19123 161 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gdf10P97737 476 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Psg29Q3URN6 468 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Lrig2Q52KR2 1054 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Foxo6Q70KY4 559 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Micall1Q8BGT6 870 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ttc22Q8C159 568 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 H6pdQ8CFX1 789 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Atxn7Q8R4I1 867 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 RnmtQ9D0L8 465 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Pacsin2Q9WVE8 486 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Tjp2Q9Z0U1 1167 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Rnaseh1O70338 285 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ctnna1P26231 906 aaKnown RBP12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Cacna2d4Q5RJF7 1116 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ccdc186Q8C9S4 917 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 GanQ8CA72 597 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ppp1r3aQ99MR9 1089 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Calr3Q9D9Q6 380 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Actn2Q9JI91 894 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Klra10Q9R1G6 266 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 DexiQ9WUQ7 95 aa12.68□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Tex13c2A0A0G2JGA3 530 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Kcnh2O35219 1162 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Serpinc1P32261 465 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Polr2fP61219 127 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Dpcr1Q3TNW5 500 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ccdc33Q3ULW6 985 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Q8C6G1 249 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Dnajc28Q8VCE1 385 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Rexo2Q9D8S4 237 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 VimP20152 466 aaKnown RBP12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Nr2f2P43135 414 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Q32P12 615 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Nhej1Q3KNJ2 295 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Asap3Q5U464 904 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Cd37Q61470 281 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Git1Q68FF6 770 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Clca4aQ6Q473 924 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 DaglaQ6WQJ1 1044 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Llgl1Q80Y17 1036 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Usp38Q8BW70 1042 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Podxl2Q8CAE9 603 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Bcas3Q8CCN5 928 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 SltmQ8CH25 1031 aaKnown RBP12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 St5Q924W7 1134 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ddx25Q9QY15 484 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Nlrp5Q9R1M5 1163 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ccdc88cQ6VGS5 2009 aa12.67□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Zfp213E9QAW0 468 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Dnajb6O54946 365 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Krt14Q61781 484 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 KaznQ69ZS8 779 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Celf4Q7TSY6 486 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ppp1r11Q8K1L5 131 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Trmt44Q9D2Q2 713 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Tmem191cQ9JJB1 302 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Ankrd2Q9WV06 328 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Fxr2Q9WVR4 673 aaKnown RBP12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Gm28036V9GXJ1 658 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Fer1l6E0CZ42 1862 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Scn11aQ9R053 1765 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 ProcP33587 460 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Mcm5P49718 733 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Pcif1P59114 706 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Myo1fP70248 1099 aa12.66□□□□□ -0.38
Col9a1-202ENSMUST00000088349 Psd3Q2PFD7 1037 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms