RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ppp2r2aQ6P1F6 447 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Serpinb3dQ6UKZ0 387 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Fra10ac1Q8BP78 315 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Trim35Q8C006 501 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Nudcd3Q8R1N4 363 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Rnf112Q96DY5 654 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Cxcl11Q9JHH5 100 aa15.03■□□□□ -0
Col3a1-201ENSMUST00000087883 Gm6370A0A0G2JGX9 315 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Gm6309L7N481 315 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Atf5O70191 283 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 DnttP09838 530 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Slc9a2Q3ZAS0 814 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Znf219Q6IQX8 726 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Adprhl2Q8CG72 370 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Tmem119Q8R138 280 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Prpsap1Q9D0M1 356 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Ddx25Q9QY15 484 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Rgs12Q8CGE9 1381 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Gm136Q3V037 328 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Ces3aQ63880 571 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Impg2Q80XH2 1243 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Ces3bQ8VCU1 571 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Zkscan3Q91VW9 553 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 EpgnQ924X1 152 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Arhgef11Q68FM7 1552 aa15.02■□□□□ -0
Col3a1-201ENSMUST00000087883 Pfdn4Q3UWL8 134 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Ddx3yQ62095 658 aaKnown RBP15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Wdr91Q7TMQ7 748 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Hpcal4Q8BGZ1 191 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 SybuQ8BHS8 665 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Slc26a6Q8CIW6 758 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Olfr247E9PVJ7 320 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Olfr819K7N727 320 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Tubgcp3P58854 905 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Tfdp1Q08639 410 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Heatr3Q8BQM4 679 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Phactr3Q8BYK5 558 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Chmp2aQ9DB34 222 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Adarb2Q9JI20 745 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Gdf11Q9Z1W4 405 aa15.02□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Kiaa1107Q80TK0 1369 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Ccdc194A0A140LIT1 234 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Usp35M0QWN7 1009 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 ThrspQ62264 150 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Acap3Q6NXL5 833 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Usp44Q8C2S0 711 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Kdm8Q9CXT6 414 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Gins2Q9D600 185 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Cnpy3Q9DAU1 276 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Eif2ak1Q9Z2R9 619 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Fmn2Q9JL04 1578 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Klhl41A2AUC9 606 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Nek1P51954 1203 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Faf1P54731 649 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Khdrbs1Q60749 443 aaKnown RBP15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 TxlngQ8BHN1 524 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Med7Q9CZB6 233 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 1700013H16RikQ9DAC5 291 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Kif21bQ9QXL1 1668 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 CoblQ5NBX1 1337 aaKnown RBP15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Igsf1Q7TQA1 1317 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Eepd1Q3TGW2 569 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Prpf6Q91YR7 941 aaKnown RBP15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Cog1Q9Z160 980 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Cyp3a57D3YYZ0 503 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Eno3P21550 434 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Mylk3Q3UIZ8 795 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 CpQ61147 1061 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Tspyl4Q8VD63 406 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Paip2bQ91W45 136 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Tex21Q9R0U9 575 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 AnkarA2RT91 1465 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Arhgap4B1AUY3 965 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Myo1eE9Q634 1107 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Gucy2cQ3UWA6 1072 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Sik1Q60670 779 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 LnpkQ7TQ95 425 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Ttll4Q80UG8 1193 aa15.01□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Gm28360A0A087WR25 190 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 4933406M09RikG3XA12 479 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 LbrQ3U9G9 626 aaKnown RBP15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Uba6Q8C7R4 1053 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 HmcesQ8R1M0 353 aaKnown RBP15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Myo3bQ1EG27 1305 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Dnajb6O54946 365 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Vti1aO89116 217 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Tmod1P49813 359 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 SftpbP50405 377 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Skap2Q3UND0 358 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Tcp10aQ80W76 438 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Slain2Q8CI08 581 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Ttll1Q91V51 423 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 SelenovD3YXG1 328 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Slc39a2G3X943 309 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Krt10P02535 570 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Gap43P06837 227 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Slc12a1P55014 1095 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 LrmpQ60664 539 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Vav2Q60992 868 aa15□□□□□ -0.01
Col3a1-201ENSMUST00000087883 Q8BWG4 1187 aa15□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms