RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 NefhP19246 1090 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Epb41l4aP52963 686 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 YdjcQ14BV6 310 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Nxf2Q4ZGD8 691 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 L1td1Q587J6 782 aaKnown RBP12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Gm5169Q5M8P2 212 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Islr2Q5RKR3 745 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Znf280dQ68FE8 974 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Dcaf15Q6PFH3 600 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Sass6Q80UK7 654 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Tbc1d22bQ80VE5 505 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Epn1Q80VP1 575 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 WhrnQ80VW5 918 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Bri3bpQ8BXV2 253 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Yars2Q8BYL4 472 aaKnown RBP12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Rtp1Q8C8C1 263 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Cdk17Q8K0D0 523 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Pstpip2Q99M15 334 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Usp26Q99MX1 835 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Rnaseh2aQ9CWY8 301 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Fsip1Q9D3V5 435 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 4931423N10RikQ9D4J9 382 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Zcchc17Q9ESX4 241 aaKnown RBP12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Elf2Q9JHC9 593 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Golgb1E9PVZ8 3238 aa12.5□□□□□ -0.41
Vamp1-202ENSMUST00000063588 JcadQ5DTX6 1320 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Mms22lB1AUR6 1238 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Hnrnph3D3Z3N4 346 aaKnown RBP12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Cyp2c68K7N6C2 491 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Gm10436L7N1Y3 520 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Cetn3O35648 167 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Eif3dO70194 548 aaKnown RBP12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Senp1P59110 640 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Rps6P62754 249 aaKnown RBP12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 SlmapQ3URD3 845 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Vwa3aQ3UVV9 1148 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Lrrn2Q6PHP6 730 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Cyp26b1Q811W2 512 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Csgalnact2Q8C1F4 542 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Bbs7Q8K2G4 715 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Med24Q99K74 987 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Kcnh7Q9ER47 1195 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Ddx20Q9JJY4 825 aaKnown RBP12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Extl3Q9WVL6 918 aa12.49□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Gm4907B1AXB9 411 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Ace3D0G895 737 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Gm38392E9Q2A2 434 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Dhx15O35286 795 aaKnown RBP12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Mmp10O55123 476 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Prl2c2P04095 224 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Lig1P37913 916 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Rad23aP54726 363 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Rbm46P86049 533 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Ogfod1Q3U0K8 545 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Mrps31Q61733 384 aaKnown RBP12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Krt74Q6IFZ9 495 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Ddx55Q6ZPL9 600 aaKnown RBP12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Supt20hQ7TT00 530 aaKnown RBP12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Pgrmc2Q80UU9 217 aaKnown RBP12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Traf3ip3Q8C0G2 513 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Cog5Q8C0L8 829 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Spice1Q8C804 860 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 GanQ8CA72 597 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Cacnb1Q8R3Z5 597 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Rfc4Q99J62 364 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Ccdc96Q9CR92 584 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Desi2Q9D291 194 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Fam217aQ9D9W6 419 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Ccdc89Q9DA73 370 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 CoasyQ9DBL7 563 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Myl7Q9QVP4 175 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Sorbs3Q9R1Z8 733 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 DexiQ9WUQ7 95 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Pappa2E9PZ87 1789 aa12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 PhipQ8VDD9 1821 aaKnown RBP12.48□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Scgb2b11A0A087WR49 112 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Lcmt1A0A0U1RNF2 332 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Zfp984A2A7A2 547 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Spocd1B1ASB6 936 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Fgd3O88842 733 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Pik3r1P26450 724 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Hoxc10P31257 342 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Cst8P32766 142 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Akr1b1P45376 316 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Rpl13P47963 211 aaKnown RBP12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Gng11P61953 73 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Traf5P70191 558 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Tfe3Q64092 572 aaKnown RBP12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Gpd2Q64521 727 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Zfp251Q6PCX8 632 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Rhbdf1Q6PIX5 856 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Tlr13Q6R5N8 991 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Ankrd24Q80VM7 985 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Siglec10Q80ZE3 688 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Haus4Q8BFT2 363 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Ttc26Q8BS45 554 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Trim47Q8C0E3 641 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Serpinb13Q8CDC0 389 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Lrp2bpQ9D4C6 346 aa12.47□□□□□ -0.41
Vamp1-202ENSMUST00000063588 Rbp7Q9EPC5 134 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms