RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Tcof1O08784 1320 aaKnown RBP9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cyp4a30bA0A087WS15 508 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rnf212bD3Z423 297 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Stx1aO35526 288 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 ItgalP24063 1163 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Bbs1Q3V3N7 593 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Colgalt2Q6NVG7 625 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Deup1Q7M6Y5 601 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Prpf38bQ80SY5 542 aaKnown RBP9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Sun2Q8BJS4 731 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Fsd2Q8BZ52 692 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Phf20l1Q8CCJ9 1013 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Pcdhb2Q91Y00 799 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 LsrQ99KG5 594 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Q9D2Q3 444 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gfpt2Q9Z2Z9 682 aa9.69□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Skint11A7XV14 364 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Grap2O89100 322 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Fam167bP17257 162 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm1604bQ3TRG0 118 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 NarsQ8BP47 559 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Fam161bQ8CB59 589 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Micu3Q9CTY5 523 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cfap161Q6P8Y0 303 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Trnau1apQ80VC6 287 aaKnown RBP9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Plpp6Q9D4F2 292 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Hsf4Q9R0L1 492 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Capn2O08529 700 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Chmp2bQ8BJF9 213 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 CnstQ8CBC4 711 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rnf219Q8K2Y0 722 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Nudt16l1Q8VHN8 211 aaKnown RBP9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Chst12Q99LL3 419 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cnpy2Q9QXT0 182 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Eif3aP23116 1344 aaKnown RBP9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Exoc4O35382 975 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Spata5Q3UMC0 893 aaKnown RBP9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Lrrc15Q80X72 579 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cyp4f39Q8BGU0 532 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Aldh8a1Q8BH00 487 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Fbxl4Q8BH70 621 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 FdpsQ920E5 353 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 EtfbQ9DCW4 255 aaKnown RBP9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Erap1Q9EQH2 930 aa9.68□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm28919A0A087WP35 240 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Mroh3A0A1D5RM54 893 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 PolP11369 1281 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tap1P21958 724 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 SqleP52019 572 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 PtnP63089 168 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Scn1bP97952 218 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 HelqQ2VPA6 1069 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 StilQ60988 1262 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Kbtbd4Q8R179 534 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Atp6v1c2Q99L60 427 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Clp1Q99LI9 425 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Pard3bQ9CSB4 1203 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 ProdhQ9WU79 599 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ehd1Q9WVK4 534 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm14525B1AZA0 212 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm2030D3Z7C4 212 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gtpbp1O08582 668 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Galnt3P70419 633 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Yars2Q8BYL4 472 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Actrt2Q9D9L5 377 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 NgdnQ9DB96 315 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gdap2Q9DBL2 498 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tsc22d3Q9Z2S7 137 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Micall2Q3TN34 1009 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Smu1Q3UKJ7 513 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rnf38Q8BI21 518 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ccdc113Q8C5T8 377 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Rpa1Q8VEE4 623 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tubgcp2Q921G8 905 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cdc26Q99JP4 85 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tppp3Q9CRB6 176 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Six6os1Q9CTN5 574 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 TcimQ9D915 106 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Arpp21Q9DCB4 807 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 KelQ9EQF2 713 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tor1aQ9ER39 333 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Galnt1O08912 559 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Terf2O35144 541 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 DglucyQ8BH86 617 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tlk1Q8C0V0 766 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 CherpQ8CGZ0 936 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Hspa14Q99M31 509 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Vps33aQ9D2N9 598 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 VarsQ9Z1Q9 1263 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Oas2E9Q9A9 742 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Kcnk9Q3LS21 402 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 EgflamQ4VBE4 1017 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Soat1Q61263 540 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 GmipQ6PGG2 971 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Tango6Q8C3S2 1079 aa9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Cse1lQ9ERK4 971 aaKnown RBP9.67□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gpatch8A2A6A1 1505 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Ttll10A4Q9F3 704 aa9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Eif2b3B1AUN2 452 aaKnown RBP9.66□□□□□ -0.86
Clcn3-202ENSMUST00000056508 Gm5152L7N200 190 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms