RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Gadd45bP22339 160 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 PuraP42669 321 aaKnown RBP20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Psmc6P62334 389 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Cep126Q0VBV7 1103 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 KhsrpQ3U0V1 748 aaKnown RBP20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Pnma5Q5DTT8 618 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Dph1Q5NCQ5 438 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Ccna1Q61456 421 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Atp1a3Q6PIC6 1013 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Olfr832Q7TRG9 312 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Nemp2Q8CB65 421 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Celf3Q8CIN6 465 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Fbxo18Q8K2I9 1042 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Tas1r1Q99PG6 842 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Dph6Q9CQ28 267 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Ndufa8Q9DCJ5 172 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 IydQ9DCX8 285 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Slc26a4Q9R155 780 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Mbtps1Q9WTZ2 1052 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Tulp1Q9Z273 543 aa20.75■□□□□ 0.91
Vti1b-201ENSMUST00000055262 MafgO54790 162 aa20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Glud1P26443 558 aaKnown RBP20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Ube2hP62257 183 aa20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Lmntd2Q0VET5 664 aa20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Prl2c1Q5SVL9 228 aa20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Avpr1aQ62463 423 aa20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Ift122Q6NWV3 1182 aa20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Cracr2bQ80ZJ8 394 aa20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 CrebrfQ8CDG5 640 aaKnown RBP20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Iqsec1Q8R0S2 961 aa20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 BcamQ9R069 622 aa20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Wdr33Q8K4P0 1330 aaKnown RBP20.74■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Gm11549A0A286YD83 63 aa20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Ces1eQ64176 562 aa20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Gpbp1Q6NXH3 473 aaKnown RBP20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Trak2Q6P9N8 913 aa20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Krt9Q6RHW0 743 aa20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Sun2Q8BJS4 731 aa20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Trmt13Q8BYH3 481 aa20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Vps53Q8CCB4 832 aa20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Trub2Q91WG3 331 aaKnown RBP20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Add3Q9QYB5 706 aaKnown RBP20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Nlrc5C3VPR6 1915 aa20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Trip11E9Q512 1976 aa20.73■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Trim12cD3Z3L3 497 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Klhl33G3UW92 533 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Actr2P61161 394 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 ZbbxQ0P5X5 716 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Arhgef16Q3U5C8 713 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Epha7Q61772 998 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Gpatch3Q8BIY1 525 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Trim47Q8C0E3 641 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Adgrg2Q8CJ12 1009 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Hps3Q91VB4 1002 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Pcdhac2Q91Y09 1006 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Tas1r3Q925D8 858 aa20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Mrvi1Q9WUX5 899 aaKnown RBP20.72■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Kmt2eQ3UG20 1868 aa20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 1700113H08RikE9Q9Q5 327 aa20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 PtprcP06800 1291 aa20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Eif3j1Q3UGC7 261 aaKnown RBP20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Ddr2Q62371 854 aa20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Usp49Q6P9L4 685 aa20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Dusp9Q7TNL7 452 aa20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Cwf19l2Q8BG79 887 aaKnown RBP20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Adnp2Q8CHC8 1165 aaKnown RBP20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Crlf2Q8CII9 359 aa20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Alas1Q8VC19 642 aa20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Gm42715A0A087WP63 3095 aaKnown RBP20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Myh9Q8VDD5 1960 aaKnown RBP20.71■□□□□ 0.91
Vti1b-201ENSMUST00000055262 Plcb2A3KGF7 1181 aa20.7■□□□□ 0.9
Vti1b-201ENSMUST00000055262 B230104I21RikQ3USW4 141 aa20.7■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Prpf4bQ61136 1007 aaKnown RBP20.7■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Olfr119Q7TRJ5 321 aa20.7■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Mtmr14Q8VEL2 648 aa20.7■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Cabp7Q91ZM8 215 aa20.7■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Cndp2Q9D1A2 475 aaKnown RBP20.7■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Pex3Q9QXY9 372 aa20.7■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Zbtb22Q9Z0G7 638 aa20.7■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Dapk3O54784 448 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Krt18P05784 423 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Tmem109Q3UBX0 243 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Tcaf3Q6QR59 914 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Zbed4Q80WQ9 1168 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 LppQ8BFW7 613 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Cnksr3Q8BMA3 555 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Azin2Q8BVM4 459 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Aldh5a1Q8BWF0 523 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Krt82Q99M74 516 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Ddx50Q99MJ9 734 aaKnown RBP20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Dclk1Q9JLM8 756 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Kntc1Q8C3Y4 2207 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Atad5Q4QY64 1826 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Arhgef10lA2AWP8 1280 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Krt78E9Q0F0 1068 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Akr1c19G3X9Y6 323 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Psmc2P46471 433 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Gm3414Q3TNU4 584 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 Ranbp17Q99NF8 1088 aa20.69■□□□□ 0.9
Vti1b-201ENSMUST00000055262 HttP42859 3119 aa20.68■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms