RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Kansl1lQ5DTI6 991 aa25.38■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Adgra2Q91ZV8 1336 aa25.38■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Prom1O54990 867 aa25.38■■□□□ 1.65
Upf3a-201ENSMUST00000043767 MymkQ9D1N4 221 aa25.38■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Rbp7Q9EPC5 134 aa25.38■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Phtf1Q9QZ09 761 aa25.38■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Ddx23D3Z0M9 819 aaKnown RBP25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Znf568E9PYI1 671 aa25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Ppef1O35655 650 aa25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Pla2g4bP0C871 782 aa25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Man1a2P39098 641 aa25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Wdr70Q3TWF6 657 aa25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Ece1Q4PZA2 769 aa25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Taf6lQ8R2K4 616 aa25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 AacsQ9D2R0 672 aa25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Cbx6Q9DBY5 414 aa25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Cabp5Q9JLK3 173 aa25.37■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Bpifb4A2BGH0 617 aa25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Nsun7Q14AW5 724 aa25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Fkbp3Q62446 224 aaKnown RBP25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Adck2Q6NSR3 617 aa25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Ankk1Q8BZ25 745 aa25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Cntnap2Q9CPW0 1332 aa25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 UgcgO88693 394 aa25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Ssrp1Q08943 708 aaKnown RBP25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Tmem192Q9CXT7 266 aa25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Rnf181Q9CY62 165 aa25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Mipol1Q9D9F8 279 aa25.36■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Rabgap1A2AWA9 1064 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Cyp2b10P12791 500 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Cyp26b1Q811W2 512 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Enox1Q8BHR2 643 aaKnown RBP25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Tbc1d10cQ8C9V1 444 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Trim32Q8CH72 655 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Mical1Q8VDP3 1048 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Pcdha12Q91Y18 950 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Katnbl1Q9CWJ3 299 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Ugt1a6bK9J7B2 531 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Morf4l1P60762 362 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Il6stQ00560 917 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Scarf1Q5ND28 820 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Cdc37Q61081 379 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Ugt1a6Q64435 531 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Ugt1a7cQ6ZQM8 531 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Ccdc113Q8C5T8 377 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 RnmtQ9D0L8 465 aaKnown RBP25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Ccdc105Q9D4K7 499 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 2310002L09RikQ9D7L5 217 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 FibpQ9JI19 357 aa25.35■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Dnajc25A2ALW5 357 aa25.34■■□□□ 1.65
Upf3a-201ENSMUST00000043767 GclcP97494 637 aa25.34■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Sval3Q76I99 144 aa25.34■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Anks1bQ8BIZ1 1259 aa25.34■■□□□ 1.65
Upf3a-201ENSMUST00000043767 NelfbQ8C4Y3 580 aa25.34■■□□□ 1.65
Upf3a-201ENSMUST00000043767 PccaQ91ZA3 724 aa25.34■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Fgd4Q91ZT5 766 aa25.34■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Tbx18Q9EPZ6 613 aa25.34■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Eya4Q9Z191 616 aa25.34■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Fam205aA2APU8 1308 aa25.34■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Zfp213E9QAW0 468 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 AurkbO70126 345 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Rnf207Q3V3A7 635 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Abcf1Q6P542 837 aaKnown RBP25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Kcnk18Q6VV64 394 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Moxd2Q7TT41 619 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Slc17a8Q8BFU8 601 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Dhx32Q8BZS9 744 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 HyiQ8R1F5 277 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Tor1aip1Q921T2 595 aaKnown RBP25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Thap2Q9D305 217 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 AW822073A0A0N4SUK1 652 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Orc4O88708 433 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Igfbp4P47879 254 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Paxbp1P58501 919 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Krt39Q6IFX4 482 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Adam6bQ6IMH7 756 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Rexo1Q7TT28 1213 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Btbd7Q8CFE5 1130 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Pcdhb12Q91Y07 789 aa25.33■■□□□ 1.65
Upf3a-201ENSMUST00000043767 Tmigd3G3X8R9 209 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Pak1O88643 545 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Pou2f2Q00196 463 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Acot10Q32MW3 439 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Rufy4Q3TYX8 563 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Mier3Q3UHF3 551 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Vwa3aQ3UVV9 1148 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Cyfip1Q7TMB8 1253 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Lrrc41Q8K1C9 807 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Txndc5Q91W90 417 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Ddah1Q9CWS0 285 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Cntn6Q9JMB8 1028 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 OgdhlE9Q7L0 1029 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Etv6P97360 485 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Zbtb7bQ64321 544 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 4930548H24RikQ9D496 437 aa25.32■■□□□ 1.64
Upf3a-201ENSMUST00000043767 IgflQ6B9Z0 140 aa25.31■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Raver2Q7TPD6 673 aa25.31■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Sdccag8Q80UF4 717 aa25.31■■□□□ 1.64
Upf3a-201ENSMUST00000043767 OtoaQ8K561 1137 aa25.31■■□□□ 1.64
Upf3a-201ENSMUST00000043767 Ddx39aQ8VDW0 427 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms