RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Actn3O88990 900 aaKnown RBP10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Znf827Q505G8 1078 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Epha7Q61772 998 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Nemp2Q8CB65 421 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Gprc5cQ8K3J9 440 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Adcy3Q8VHH7 1145 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 CoasyQ9DBL7 563 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Pdcd6ipQ9WU78 869 aaKnown RBP10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Col4a3Q9QZS0 1669 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 NinQ61043 2035 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Ube3aO08759 870 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Men1O88559 611 aaKnown RBP10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 LdhbP16125 334 aaKnown RBP10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Tcp11Q01755 566 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Sfi1Q3UZY0 1216 aaKnown RBP10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Nlrp2Q4PLS0 1046 aaKnown RBP10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Gm5169Q5M8P2 212 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Kif5bQ61768 963 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Pnpla2Q8BJ56 486 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 Bicdl2Q8CHW5 507 aa10.09□□□□□ -0.79
Ctnna1-201ENSMUST00000042345 JcadQ5DTX6 1320 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Apol6B7ZC55 329 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Stat4P42228 749 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 YdjcQ14BV6 310 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Hoxa13Q62424 386 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Q8C1R3 189 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cd248Q91V98 765 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Krt82Q99M74 516 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 SetQ9EQU5 289 aaKnown RBP10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Gm11983V9GXS8 105 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Pcdh15Q99PJ1 1943 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tal1P22091 329 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Abcd1P48410 736 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Bace1P56818 501 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Rit2P70425 217 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Eme2Q56A04 373 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 CtcfQ61164 736 aaKnown RBP10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Irak1Q62406 710 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Snd1Q78PY7 910 aaKnown RBP10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Dusp19Q8K4T5 220 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 AdarQ99MU3 1178 aaKnown RBP10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Myo5aQ99104 1853 aaKnown RBP10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Pgap3A2A559 320 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Fam129cD3YZB0 591 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ppp1r9aH3BJD6 1292 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Psmb7P70195 277 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Irf6P97431 467 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 NeblQ0II04 452 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Atp8b1Q148W0 1251 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ccdc42Q5SV66 316 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tsg101Q61187 391 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ctnna3Q65CL1 895 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Raver2Q7TPD6 673 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Slc14a1Q8VHL0 384 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Slc25a38Q91XD8 326 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ccdc96Q9CR92 584 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 BcamQ9R069 622 aa10.08□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Thsd7bQ6P4U0 1607 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Senp1P59110 640 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Btnl9Q8BJE2 536 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Acat1Q8QZT1 424 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Bst2Q8R2Q8 172 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Dnajc18Q9CZJ9 357 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Sbno2Q7TNB8 1349 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Per1O35973 1291 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Pja1O55176 578 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Itgb5O70309 798 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tph1P17532 447 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Pdlim7Q3TJD7 457 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Fam183bQ5NC57 135 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Trim25Q61510 634 aaKnown RBP10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Ces1eQ64176 562 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Eif3j2Q66JS6 263 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Nr3c2Q8VII8 978 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Eif4a3Q91VC3 411 aaKnown RBP10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Kif17Q99PW8 1038 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 PdclQ9DBX2 301 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tlr2Q9QUN7 784 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Sorbs3Q9R1Z8 733 aa10.07□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Rbm46P86049 533 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 LbrQ3U9G9 626 aaKnown RBP10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Stxbp2Q64324 593 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 IgflQ6B9Z0 140 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cep70Q6IQY5 616 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cc2d1bQ8BRN9 848 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Lmo3Q8BZL8 145 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Csgalnact2Q8C1F4 542 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tspan8Q8R3G9 235 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 4921524L21RikQ9D5T2 438 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Add1Q9QYC0 735 aaKnown RBP10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 ArP19091 899 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Tgfb2P27090 414 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Rps12P63323 132 aaKnown RBP10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Cbx1P83917 185 aaKnown RBP10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Fgfr4Q03142 799 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Zfp953Q3UPV7 304 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 4933427I04RikQ3V053 235 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Znf652Q5DU09 608 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Hpcal4Q8BGZ1 191 aa10.06□□□□□ -0.8
Ctnna1-201ENSMUST00000042345 Bcas3Q8CCN5 928 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms