RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Srrm3Q80WV7 648 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Akt1s1Q9D1F4 257 aa20.58■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Trim30cD3YVI9 513 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Vmn2r78K7N6U5 853 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 InhbeO08717 350 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Copb2O55029 905 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Mettl14Q3UIK4 456 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Klrg2Q3UM83 387 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Lrig2Q52KR2 1054 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Tbc1d9bQ5SVR0 1263 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Fam196bQ6GQV1 535 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Slc51bQ80WK2 128 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Ddx10Q80Y44 875 aaKnown RBP20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Il17cQ8K4C5 194 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Usp14Q9JMA1 493 aaKnown RBP20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Add1Q9QYC0 735 aaKnown RBP20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Plxnb2B2RXS4 1842 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 D1Pas1P16381 660 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Ighmbp2P40694 993 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Rasip1Q3U0S6 961 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Dhx37Q6NZL1 1150 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Actn1Q7TPR4 892 aaKnown RBP20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Rufy1Q8BIJ7 712 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Ift74Q8BKE9 600 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 P3h4Q8K2B0 443 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Arl2bpQ9D385 163 aa20.57■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Pja1O55176 578 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 AurkbO70126 345 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 FechP22315 420 aaKnown RBP20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Nlrp4cQ3TKR3 982 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Akap4Q60662 849 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Nell2Q61220 819 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Pak2Q8CIN4 524 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Trap1Q9CQN1 706 aaKnown RBP20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Josd2Q9CR30 188 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Styxl1Q9DAR2 321 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Prpf4Q9DAW6 521 aaKnown RBP20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Dpcr1Q3TNW5 500 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Fnbp1Q80TY0 616 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Bola2Q8BGS2 86 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Alg1Q921Q3 482 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 2310002L09RikQ9D7L5 217 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Sept14Q9DA97 430 aa20.56■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Col5a2Q3U962 1497 aa20.55■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Lmnb2P21619 596 aaKnown RBP20.55■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Eps15P42567 897 aa20.55■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Psmc6P62334 389 aa20.55■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Meis2P97367 477 aa20.55■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Micall1Q8BGT6 870 aa20.55■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Chtf18Q8BIW9 969 aa20.55■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Gpr180Q8BPS4 441 aa20.55■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Rfc4Q99J62 364 aa20.55■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Tfr2Q9JKX3 798 aa20.55■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 EporP14753 507 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Spout1Q3UHX9 385 aaKnown RBP20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Nr1d1Q3UV55 615 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Asap3Q5U464 904 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Sycp1Q62209 993 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Naa35Q6PHQ8 725 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Naa15Q80UM3 865 aaKnown RBP20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Ccdc181Q80ZU5 509 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Usp38Q8BW70 1042 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Emilin2Q8K482 1074 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Msantd4Q91YU3 345 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Usp17lbE9Q9U0 468 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Mmp15O54732 657 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Serpinc1P32261 465 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 PltpP55065 493 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Rsad1Q5SUV1 442 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Rpap2Q8VC34 614 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Yipf1Q91VU1 306 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Bhmt2Q91WS4 363 aa20.54■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Ttll10A4Q9F3 704 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Dok7Q18PE0 504 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Q6PD19 689 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 BC048507Q80ZS7 89 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Q91Z58 1206 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Smc6Q924W5 1097 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Nfxl1E9Q8I7 918 aaKnown RBP20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Tnnc1P19123 161 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Wdr70Q3TWF6 657 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Meis1Q60954 390 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Hdac10Q6P3E7 666 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 SugctQ7TNE1 436 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Ttc22Q8C159 568 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 CpzQ8R4V4 654 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 CbsQ91WT9 561 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Slc5a5Q99PN0 618 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Ddx47Q9CWX9 455 aaKnown RBP20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 ArcQ9WV31 396 aa20.53■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Trappc11B2RXC1 1133 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Esr2O08537 530 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Gna15P30678 374 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Rbm46P86049 533 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Zc3h18Q0P678 948 aaKnown RBP20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Zmym1Q3TJB1 983 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Ptger2Q62053 362 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Znf18Q810A1 556 aa20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Fam193aQ8CGI1 1231 aaKnown RBP20.52■□□□□ 0.88
Shkbp1-201ENSMUST00000003857 Rnf34Q99KR6 376 aa20.52■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms