RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C TY2B-LR1P0C2J3 1770 aa3.19□□□□□ -1.9
HRD1YOL013C TY2B-FP0CX63 1770 aa3.19□□□□□ -1.9
HRD1YOL013C TY2B-GR2P0CX64 1770 aa3.19□□□□□ -1.9
HRD1YOL013C TY2B-CP25384 1770 aa3.19□□□□□ -1.9
HRD1YOL013C TY2B-DR2Q03494 1770 aa3.19□□□□□ -1.9
HRD1YOL013C TY1B-DR1Q03855 1755 aa3.19□□□□□ -1.9
HRD1YOL013C TY2B-DR3Q07791 1770 aaKnown RBP3.19□□□□□ -1.9
HRD1YOL013C TY2B-OR1Q12113 1770 aa3.19□□□□□ -1.9
HRD1YOL013C TY2B-DR1Q12472 1770 aa3.19□□□□□ -1.9
HRD1YOL013C TY2B-OR2Q12501 1770 aa3.19□□□□□ -1.9
HRD1YOL013C GPH1P06738 902 aaKnown RBP3.18□□□□□ -1.9
HRD1YOL013C NFT1P0CE68 1218 aa3.18□□□□□ -1.9
HRD1YOL013C CNA1P23287 553 aa3.18□□□□□ -1.9
HRD1YOL013C SGV1P23293 657 aaKnown RBP3.18□□□□□ -1.9
HRD1YOL013C PSO2P30620 661 aa3.18□□□□□ -1.9
HRD1YOL013C SIN4P32259 974 aa3.18□□□□□ -1.9
HRD1YOL013C KKQ8P36004 724 aa3.18□□□□□ -1.9
HRD1YOL013C DBP8P38719 431 aa3.18□□□□□ -1.9
HRD1YOL013C STN1P38960 494 aa3.18□□□□□ -1.9
HRD1YOL013C INA22P40576 216 aa3.18□□□□□ -1.9
HRD1YOL013C YHC3P47040 408 aa3.18□□□□□ -1.9
HRD1YOL013C GTO1P48239 356 aa3.18□□□□□ -1.9
HRD1YOL013C PIB2P53191 635 aa3.18□□□□□ -1.9
HRD1YOL013C YTP1P53584 459 aa3.18□□□□□ -1.9
HRD1YOL013C MNT4P53745 580 aa3.18□□□□□ -1.9
HRD1YOL013C YDR541CQ03049 344 aa3.18□□□□□ -1.9
HRD1YOL013C VAC14Q06708 880 aa3.18□□□□□ -1.9
HRD1YOL013C DIB1Q06819 143 aaPredicted RBP3.18□□□□□ -1.9
HRD1YOL013C AHA1Q12449 350 aaKnown RBP3.18□□□□□ -1.9
HRD1YOL013C SKI3P17883 1432 aaKnown RBP3.18□□□□□ -1.9
HRD1YOL013C RAV1P47104 1357 aa3.18□□□□□ -1.9
HRD1YOL013C YPR089WO13585 888 aa3.17□□□□□ -1.9
HRD1YOL013C BI2P03873 423 aa3.17□□□□□ -1.9
HRD1YOL013C SPE2P21182 396 aa3.17□□□□□ -1.9
HRD1YOL013C URE2P23202 354 aaKnown RBP3.17□□□□□ -1.9
HRD1YOL013C HXT2P23585 541 aa3.17□□□□□ -1.9
HRD1YOL013C MEK1P24719 497 aaPredicted RBP3.17□□□□□ -1.9
HRD1YOL013C PTC6P25646 442 aa3.17□□□□□ -1.9
HRD1YOL013C SOR1P35497 357 aaKnown RBP3.17□□□□□ -1.9
HRD1YOL013C DUG2P38149 878 aa3.17□□□□□ -1.9
HRD1YOL013C YBL028CP38202 106 aa3.17□□□□□ -1.9
HRD1YOL013C QDR3P38227 689 aa3.17□□□□□ -1.9
HRD1YOL013C YER130CP39959 443 aa3.17□□□□□ -1.9
HRD1YOL013C SEC9P40357 651 aa3.17□□□□□ -1.9
HRD1YOL013C YGL114WP53134 725 aa3.17□□□□□ -1.9
HRD1YOL013C TIM21P53220 239 aa3.17□□□□□ -1.9
HRD1YOL013C YMR102CQ03177 834 aa3.17□□□□□ -1.9
HRD1YOL013C YMR178WQ03219 274 aaKnown RBP3.17□□□□□ -1.9
HRD1YOL013C ATC1Q04005 294 aa3.17□□□□□ -1.9
HRD1YOL013C ERV41Q04651 352 aa3.17□□□□□ -1.9
HRD1YOL013C BOP2Q06150 570 aa3.17□□□□□ -1.9
HRD1YOL013C SOR2Q07786 357 aa3.17□□□□□ -1.9
HRD1YOL013C SPO24Q3E752 67 aa3.17□□□□□ -1.9
HRD1YOL013C MYO2P19524 1574 aaKnown RBP3.17□□□□□ -1.9
HRD1YOL013C TY1B-DR3Q99231 1755 aa3.17□□□□□ -1.9
HRD1YOL013C YPT1P01123 206 aaKnown RBP3.17□□□□□ -1.9
HRD1YOL013C ADE4P04046 510 aaKnown RBP3.17□□□□□ -1.9
HRD1YOL013C RHO2P06781 192 aa3.17□□□□□ -1.9
HRD1YOL013C SSA3P09435 649 aaKnown RBP3.17□□□□□ -1.9
HRD1YOL013C RAD23P32628 398 aaKnown RBP3.17□□□□□ -1.9
HRD1YOL013C PEX18P38855 283 aa3.17□□□□□ -1.9
HRD1YOL013C ALP1P38971 573 aa3.17□□□□□ -1.9
HRD1YOL013C LAS21P40367 830 aa3.17□□□□□ -1.9
HRD1YOL013C EMC2P47133 292 aaKnown RBP3.17□□□□□ -1.9
HRD1YOL013C BRO1P48582 844 aa3.17□□□□□ -1.9
HRD1YOL013C YGR126WP53274 230 aa3.17□□□□□ -1.9
HRD1YOL013C BUD32P53323 261 aa3.17□□□□□ -1.9
HRD1YOL013C IDP3P53982 420 aaKnown RBP3.17□□□□□ -1.9
HRD1YOL013C MPS1P54199 764 aa3.17□□□□□ -1.9
HRD1YOL013C RSC9Q03124 581 aa3.17□□□□□ -1.9
HRD1YOL013C PFA5Q03289 374 aa3.17□□□□□ -1.9
HRD1YOL013C RRG8Q06109 277 aa3.17□□□□□ -1.9
HRD1YOL013C YLR173WQ06247 608 aa3.17□□□□□ -1.9
HRD1YOL013C RAD34Q06665 692 aa3.17□□□□□ -1.9
HRD1YOL013C MDM36Q06820 579 aa3.17□□□□□ -1.9
HRD1YOL013C THP1Q08231 455 aa3.17□□□□□ -1.9
HRD1YOL013C LEA1Q08963 238 aaPredicted RBP3.17□□□□□ -1.9
HRD1YOL013C CFT1Q06632 1357 aaKnown RBP3.16□□□□□ -1.9
HRD1YOL013C BPT1P14772 1559 aa3.16□□□□□ -1.9
HRD1YOL013C RNR2P09938 399 aaKnown RBP3.16□□□□□ -1.9
HRD1YOL013C YMR085WP0CF18 432 aa3.16□□□□□ -1.9
HRD1YOL013C RSR1P13856 272 aa3.16□□□□□ -1.9
HRD1YOL013C RPB4P20433 221 aaPredicted RBP3.16□□□□□ -1.9
HRD1YOL013C TKL1P23254 680 aaKnown RBP3.16□□□□□ -1.9
HRD1YOL013C YUR1P26725 428 aa3.16□□□□□ -1.9
HRD1YOL013C YPS1P32329 569 aa3.16□□□□□ -1.9
HRD1YOL013C ASF2P32448 525 aaPredicted RBP3.16□□□□□ -1.9
HRD1YOL013C ATP11P32453 318 aa3.16□□□□□ -1.9
HRD1YOL013C KRE6P32486 720 aa3.16□□□□□ -1.9
HRD1YOL013C NRP1P32770 719 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
HRD1YOL013C PRS1P32895 427 aaKnown RBP3.16□□□□□ -1.9
HRD1YOL013C BUD2P33314 1104 aa3.16□□□□□ -1.9
HRD1YOL013C MSN2P33748 704 aa3.16□□□□□ -1.9
HRD1YOL013C TCM62P38228 572 aaKnown RBP3.16□□□□□ -1.9
HRD1YOL013C YHR045WP38775 560 aa3.16□□□□□ -1.9
HRD1YOL013C YMR124WP39523 943 aaKnown RBP3.16□□□□□ -1.9
HRD1YOL013C SNT309Q06091 175 aaPredicted RBP3.16□□□□□ -1.9
HRD1YOL013C BUG1Q12191 341 aa3.16□□□□□ -1.9
HRD1YOL013C FMP16Q12497 93 aa3.16□□□□□ -1.9
HRD1YOL013C SRN2Q99176 213 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 108.1 ms