RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeastyeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT21YMR179W RAV1P47104 1357 aa1.34□□□□□ -2.2
SPT21YMR179W RPL3P14126 387 aaKnown RBP1.33□□□□□ -2.2
SPT21YMR179W CLC1P17891 233 aa1.33□□□□□ -2.2
SPT21YMR179W PPH22P23595 377 aa1.33□□□□□ -2.2
SPT21YMR179W CLB1P24868 471 aa1.33□□□□□ -2.2
SPT21YMR179W ERV1P27882 189 aa1.33□□□□□ -2.2
SPT21YMR179W URA7P28274 579 aaKnown RBP1.33□□□□□ -2.2
SPT21YMR179W RML2P32611 393 aa1.33□□□□□ -2.2
SPT21YMR179W MNS1P32906 549 aa1.33□□□□□ -2.2
SPT21YMR179W CAF130P53280 1122 aaPredicted RBP1.33□□□□□ -2.2
SPT21YMR179W SXM1Q04175 944 aaKnown RBP1.33□□□□□ -2.2
SPT21YMR179W AIM32Q04689 311 aa1.33□□□□□ -2.2
SPT21YMR179W LEU4P06208 619 aaKnown RBP1.33□□□□□ -2.2
SPT21YMR179W NFT1P0CE68 1218 aa1.33□□□□□ -2.2
SPT21YMR179W YAR066WP0CX18 203 aa1.33□□□□□ -2.2
SPT21YMR179W YHR214WP0CX19 203 aa1.33□□□□□ -2.2
SPT21YMR179W SNT1P25357 1226 aa1.33□□□□□ -2.2
SPT21YMR179W IDH2P28241 369 aaKnown RBP1.33□□□□□ -2.2
SPT21YMR179W APE3P37302 537 aaKnown RBP1.33□□□□□ -2.2
SPT21YMR179W RIB5P38145 238 aa1.33□□□□□ -2.2
SPT21YMR179W YBR137WP38276 179 aa1.33□□□□□ -2.2
SPT21YMR179W VMA13P41807 478 aaKnown RBP1.33□□□□□ -2.2
SPT21YMR179W ZIM17P42844 174 aa1.33□□□□□ -2.2
SPT21YMR179W MNP1P53163 194 aaPredicted RBP1.33□□□□□ -2.2
SPT21YMR179W SOV1Q04748 898 aa1.33□□□□□ -2.2
SPT21YMR179W AFI1Q99222 893 aa1.33□□□□□ -2.2
SPT21YMR179W HSP82P02829 709 aaKnown RBP1.32□□□□□ -2.2
SPT21YMR179W CPR2P23285 205 aa1.32□□□□□ -2.2
SPT21YMR179W RAD14P28519 371 aa1.32□□□□□ -2.2
SPT21YMR179W ITR1P30605 584 aa1.32□□□□□ -2.2
SPT21YMR179W SWI3P32591 825 aa1.32□□□□□ -2.2
SPT21YMR179W YME2P32843 850 aa1.32□□□□□ -2.2
SPT21YMR179W POP1P41812 875 aa1.32□□□□□ -2.2
SPT21YMR179W TCB2P48231 1178 aa1.32□□□□□ -2.2
SPT21YMR179W YGR149WP48236 432 aa1.32□□□□□ -2.2
SPT21YMR179W CWC25P53854 179 aaKnown RBP1.32□□□□□ -2.2
SPT21YMR179W VPS9P54787 451 aa1.32□□□□□ -2.2
SPT21YMR179W CIK1Q01649 594 aa1.32□□□□□ -2.2
SPT21YMR179W KAP120Q02932 1032 aa1.32□□□□□ -2.2
SPT21YMR179W ERO1Q03103 563 aa1.32□□□□□ -2.2
SPT21YMR179W RCF1Q03713 159 aa1.32□□□□□ -2.2
SPT21YMR179W DON1Q05610 365 aa1.32□□□□□ -2.2
SPT21YMR179W SIL1Q08199 421 aa1.32□□□□□ -2.2
SPT21YMR179W YBL111CQ3E7Y5 667 aa1.32□□□□□ -2.2
SPT21YMR179W SPS4P09937 338 aa1.32□□□□□ -2.2
SPT21YMR179W MDH1P17505 334 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
SPT21YMR179W MNE1P24720 663 aa1.32□□□□□ -2.2
SPT21YMR179W SPB1P25582 841 aaPredicted RBP1.32□□□□□ -2.2
SPT21YMR179W AFG1P32317 509 aa1.32□□□□□ -2.2
SPT21YMR179W NUP2P32499 720 aa1.32□□□□□ -2.2
SPT21YMR179W TFB1P32776 642 aa1.32□□□□□ -2.2
SPT21YMR179W JEM1P40358 645 aa1.32□□□□□ -2.2
SPT21YMR179W CAK1P43568 368 aaPredicted RBP1.32□□□□□ -2.2
SPT21YMR179W FMS1P50264 508 aa1.32□□□□□ -2.2
SPT21YMR179W YGL108CP53139 140 aa1.32□□□□□ -2.2
SPT21YMR179W OAZ1Q02803 292 aa1.32□□□□□ -2.2
SPT21YMR179W PAR32Q12515 295 aaKnown RBP1.32□□□□□ -2.2
SPT21YMR179W CCH1P50077 2039 aa1.31□□□□□ -2.2
SPT21YMR179W TRP1P00912 224 aa1.31□□□□□ -2.2
SPT21YMR179W RHO2P06781 192 aa1.31□□□□□ -2.2
SPT21YMR179W TIP1P27654 210 aaPredicted RBP1.31□□□□□ -2.2
SPT21YMR179W KKQ8P36004 724 aa1.31□□□□□ -2.2
SPT21YMR179W YCR041WP37265 110 aa1.31□□□□□ -2.2
SPT21YMR179W THI2P38141 450 aa1.31□□□□□ -2.2
SPT21YMR179W NTC20P38302 140 aaPredicted RBP1.31□□□□□ -2.2
SPT21YMR179W LCB2P40970 561 aa1.31□□□□□ -2.2
SPT21YMR179W GAB1P41733 394 aa1.31□□□□□ -2.2
SPT21YMR179W BUD27P43573 796 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
SPT21YMR179W COS5P47187 383 aa1.31□□□□□ -2.2
SPT21YMR179W SSN8P47821 323 aa1.31□□□□□ -2.2
SPT21YMR179W YGL138CP53122 345 aa1.31□□□□□ -2.2
SPT21YMR179W SKO1Q02100 647 aa1.31□□□□□ -2.2
SPT21YMR179W GYL1Q04322 720 aa1.31□□□□□ -2.2
SPT21YMR179W RRP45Q05636 305 aaKnown RBP1.31□□□□□ -2.2
SPT21YMR179W COS7Q07788 383 aa1.31□□□□□ -2.2
SPT21YMR179W GPM3Q12326 303 aa1.31□□□□□ -2.2
SPT21YMR179W OPI1P21957 404 aa1.31□□□□□ -2.2
SPT21YMR179W KAR9P32526 644 aa1.31□□□□□ -2.2
SPT21YMR179W MDL1P33310 695 aa1.31□□□□□ -2.2
SPT21YMR179W APE4P38821 490 aa1.31□□□□□ -2.2
SPT21YMR179W GDI1P39958 451 aaKnown RBP1.31□□□□□ -2.2
SPT21YMR179W UTP18P40362 594 aaPredicted RBP1.31□□□□□ -2.2
SPT21YMR179W LAM5P43560 674 aa1.31□□□□□ -2.2
SPT21YMR179W YJR085CP47131 105 aaKnown RBP1.31□□□□□ -2.2
SPT21YMR179W OCA1P50946 238 aaPredicted RBP1.31□□□□□ -2.2
SPT21YMR179W YIP1P53039 248 aa1.31□□□□□ -2.2
SPT21YMR179W RMD9P53140 646 aaKnown RBP1.31□□□□□ -2.2
SPT21YMR179W YMR181CQ03231 154 aa1.31□□□□□ -2.2
SPT21YMR179W PPM1Q04081 328 aa1.31□□□□□ -2.2
SPT21YMR179W CUE5Q08412 411 aaKnown RBP1.31□□□□□ -2.2
SPT21YMR179W CYC3P06182 269 aa1.3□□□□□ -2.2
SPT21YMR179W GPH1P06738 902 aaKnown RBP1.3□□□□□ -2.2
SPT21YMR179W SRV2P17555 526 aaKnown RBP1.3□□□□□ -2.2
SPT21YMR179W ATP10P18496 279 aa1.3□□□□□ -2.2
SPT21YMR179W RRP7P25368 297 aaPredicted RBP1.3□□□□□ -2.2
SPT21YMR179W DPH2P32461 534 aa1.3□□□□□ -2.2
SPT21YMR179W NIP100P33420 868 aa1.3□□□□□ -2.2
SPT21YMR179W MRPL10P36520 322 aa1.3□□□□□ -2.2
SPT21YMR179W SLM4P38247 162 aa1.3□□□□□ -2.2
SPT21YMR179W RXT2P38255 430 aa1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms