RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 EPHB4P54760 987 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 FAM153CQ494X1 144 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 TTMPQ5BVD1 217 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 DNAJC21Q5F1R6 531 aaKnown RBP15.26■□□□□ 0.03
PHGDH-233ENST00000642021 FAM26FQ5R3K3 315 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 PPP4R3AQ6IN85 833 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 C8orf74Q6P047 294 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 PACSIN1Q9BY11 444 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 EDEM3Q9BZQ6 932 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 CEP72Q9P209 647 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 FAM153AQ9UHL3 310 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 PCDHA2Q9Y5H9 948 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 COL24A1Q17RW2 1714 aa15.26■□□□□ 0.03
PHGDH-233ENST00000642021 AHDC1Q5TGY3 1603 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-233ENST00000642021 A0A087X0T9 212 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 FAM228BP0C875 321 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 CLK2P49760 499 aaKnown RBP15.25■□□□□ 0.03
PHGDH-233ENST00000642021 CORO7P57737 925 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 RNASE9P60153 205 aaKnown RBP15.25■□□□□ 0.03
PHGDH-233ENST00000642021 TRADDQ15628 312 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 SLC9C1Q4G0N8 1177 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 SFMBT2Q5VUG0 894 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 DPP8Q6V1X1 898 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-233ENST00000642021 PROM2Q8N271 834 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 RNF10Q8N5U6 811 aaKnown RBP15.25■□□□□ 0.03
PHGDH-233ENST00000642021 FAM163AQ96GL9 167 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-233ENST00000642021 hCG_1984214I3L0E3 225 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 RFC4P35249 363 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 PSEN1P49768 467 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 GABPAQ06546 454 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 ASPRV1Q53RT3 343 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 ZNF713Q8N859 430 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-233ENST00000642021 CNBD1Q8NA66 436 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 POLLQ9UGP5 575 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 ADAMTS1Q9UHI8 967 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 PCDHA12Q9UN75 941 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 KIAA1024Q9UPX6 916 aa15.25■□□□□ 0.03
PHGDH-233ENST00000642021 SERPING1P05155 500 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 PLCG2P16885 1265 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 EMBQ6PCB8 327 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 DDX4Q9NQI0 724 aaKnown RBP15.24■□□□□ 0.03
PHGDH-233ENST00000642021 ATP6V0A2Q9Y487 856 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 DAGLAQ9Y4D2 1042 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 GAKO14976 1311 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 IGKV6D-41A0A0C4DH26 115 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 PNMA6FA0A0J9YX94 578 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 MAGEA9P43362 315 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 ZNF543Q08ER8 600 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 NAB2Q15742 525 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 CFAP221Q4G0U5 840 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 PRR5LQ6MZQ0 368 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 DNAAF5Q86Y56 855 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 TRIM59Q8IWR1 403 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 SCFD1Q8WVM8 642 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 ZIM3Q96PE6 472 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 CAPS2Q9BXY5 557 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 POLD4Q9HCU8 107 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 NFU1Q9UMS0 254 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 GRIN2DO15399 1336 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 CDK5RAP2Q96SN8 1893 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L10C9JJH3 530 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 KRT14P02533 472 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 CCT5P48643 541 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 PPFIA1Q13136 1202 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 FAM133AQ8N9E0 248 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 RUBCNQ92622 972 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 CAVIN3Q969G5 261 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.24■□□□□ 0.03
PHGDH-233ENST00000642021 LRRC27Q9C0I9 530 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 KCTD10Q9H3F6 313 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 EPB41L5Q9HCM4 733 aa15.24■□□□□ 0.03
PHGDH-233ENST00000642021 POTEB3A0JP26 581 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 POTECB2RU33 542 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L15C9J2P7 530 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L13C9JLJ4 530 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L11C9JVI0 530 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L18D6R9N7 530 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L22D6RA61 530 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L17D6RBQ6 530 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L19D6RCP7 530 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L20D6RJB6 530 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 MARCH6O60337 910 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 GUCY2DQ02846 1103 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L24Q0WX57 530 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 RAPGEF1Q13905 1077 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 HERC4Q5GLZ8 1057 aaPredicted RBP15.23■□□□□ 0.03
PHGDH-233ENST00000642021 ZNF831Q5JPB2 1677 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 FOXR2Q6PJQ5 311 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 USP17L6PQ6QN14 398 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 POTEBQ6S5H4 581 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 PACS2Q86VP3 889 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 SH2D3CQ8N5H7 860 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 IFT81Q8WYA0 676 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 SYN2Q92777 582 aaPredicted RBP15.23■□□□□ 0.03
PHGDH-233ENST00000642021 GDF3Q9NR23 364 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 GGA1Q9UJY5 639 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.23■□□□□ 0.03
PHGDH-233ENST00000642021 GOLGA8KD6RF30 607 aa15.23■□□□□ 0.03
PHGDH-233ENST00000642021 F8W031 263 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms