RNA–Protein interactions for RNA: ENST00000641759.1

MTHFR-215, Transcript of methylenetetrahydrofolate reductase, human

Gene MTHFR, Length 2,454 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTHFR-215	ENST00000641759	USP17L15	C9J2P7	530 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	USP17L13	C9JLJ4	530 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	USP17L11	C9JVI0	530 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	USP17L18	D6R9N7	530 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	USP17L22	D6RA61	530 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	USP17L17	D6RBQ6	530 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	USP17L19	D6RCP7	530 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	USP17L20	D6RJB6	530 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	EPHB4	P54760	987 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	GUCY2D	Q02846	1103 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	USP17L24	Q0WX57	530 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	PSMD2	Q13200	908 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	RAPGEF1	Q13905	1077 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	KIAA0753	Q2KHM9	967 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	ZCWPW2	Q504Y3	356 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	USP17L6P	Q6QN14	398 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	SH2D3C	Q8N5H7	860 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	FAM133A	Q8N9E0	248 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	CAPS2	Q9BXY5	557 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	SSU72P8	A0A1W2PR75	194 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	PLCG2	P16885	1265 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	ORC2	Q13416	577 aa	Predicted RBP	13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	CEP72	Q9P209	647 aa		13.91	□□□□□ -0.18
MTHFR-215	ENST00000641759	ABCB11	O95342	1321 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	PNMA6F	A0A0J9YX94	578 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	POTEB3	A0JP26	581 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	POTEC	B2RU33	542 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	USP17L10	C9JJH3	530 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	SERPING1	P05155	500 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	GUCY2F	P51841	1108 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	CORO7	P57737	925 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	GTF2I	P78347	998 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	TTMP	Q5BVD1	217 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	TRAPPC3L	Q5T215	181 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	PPP4R3A	Q6IN85	833 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	POTEB	Q6S5H4	581 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	RNF10	Q8N5U6	811 aa	Known RBP	13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	BCAS4	Q8TDM0	211 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	RUFY1	Q96T51	708 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	KRT12	Q99456	494 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	GOLPH3	Q9H4A6	298 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	PSTPIP2	Q9H939	334 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	POLL	Q9UGP5	575 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	GGA1	Q9UJY5	639 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	COL5A3	P25940	1745 aa	Predicted RBP	13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	C6orf229	H3BNL8	230 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	MPHOSPH10	O00566	681 aa	Known RBP	13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	SHOX2	O60902	331 aa	Predicted RBP	13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	HEXIM1	O94992	359 aa	Known RBP	13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	ACTN1	P12814	892 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	STAT3	P40763	770 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	MAGEA9	P43362	315 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	NOV	P48745	357 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	ATP1A2	P50993	1020 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	GNGT1	P63211	74 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	PPARD	Q03181	441 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	ADAM9	Q13443	819 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	ASPRV1	Q53RT3	343 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	EMB	Q6PCB8	327 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	PROM2	Q8N271	834 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	ZIM3	Q96PE6	472 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	ATP6V0A2	Q9Y487	856 aa		13.9	□□□□□ -0.18
MTHFR-215	ENST00000641759	RIMBP2	O15034	1052 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	HSF2BP	O75031	334 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	PLA2G4B	P0C869	781 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	IL1R1	P14778	569 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	ZNF543	Q08ER8	600 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	KLHL30	Q0D2K2	578 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	PPFIA1	Q13136	1202 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	NAB2	Q15742	525 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	GPBP1	Q86WP2	473 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	SCFD1	Q8WVM8	642 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	CUL5	Q93034	780 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	SH3GL2	Q99962	352 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	LRRC27	Q9C0I9	530 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	DDX4	Q9NQI0	724 aa	Known RBP	13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	EMILIN3	Q9NT22	766 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	DAGLA	Q9Y4D2	1042 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	WNK3	Q9BYP7	1800 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	RBAK-RBAKDN	I3L0D1	243 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	RGL2	O15211	777 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	EPS15	P42566	896 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	SLC18A3	Q16572	532 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	PRR5L	Q6MZQ0	368 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	FAM196A	Q6ZSG2	479 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	TRIM59	Q8IWR1	403 aa		13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	CCDC43	Q96MW1	224 aa	Known RBP	13.89	□□□□□ -0.19
MTHFR-215	ENST00000641759	LTBP4	Q8N2S1	1624 aa		13.88	□□□□□ -0.19
MTHFR-215	ENST00000641759	GOLGA8K	D6RF30	607 aa		13.88	□□□□□ -0.19
MTHFR-215	ENST00000641759	OPA1	O60313	960 aa		13.88	□□□□□ -0.19
MTHFR-215	ENST00000641759	TTLL1	O95922	423 aa		13.88	□□□□□ -0.19
MTHFR-215	ENST00000641759	KRT18	P05783	430 aa	Known RBP	13.88	□□□□□ -0.19
MTHFR-215	ENST00000641759	SNHG28	P0DPA3	235 aa		13.88	□□□□□ -0.19
MTHFR-215	ENST00000641759	CASP5	P51878	434 aa		13.88	□□□□□ -0.19
MTHFR-215	ENST00000641759	MRPL12	P52815	198 aa	Known RBP	13.88	□□□□□ -0.19
MTHFR-215	ENST00000641759	KCNH2	Q12809	1159 aa		13.88	□□□□□ -0.19
MTHFR-215	ENST00000641759	PACS2	Q86VP3	889 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms